RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ASPRV1Q53RT3 343 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 IRAK1BP1Q5VVH5 260 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 KCTD11Q693B1 232 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 OR4A47Q6IF82 309 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 ZNF852Q6ZMS4 543 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 ZNF554Q86TJ5 538 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 ANKRD46Q86W74 232 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 KLHDC1Q8N7A1 406 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 KBTBD3Q8NAB2 608 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 CLEC1AQ8NC01 280 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 SMG7Q92540 1137 aaKnown RBP4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 RTP4Q96DX8 246 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 SPATA13Q96N96 652 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 GAL3ST4Q96RP7 486 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 ZMYND12Q9H0C1 365 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 ACTL8Q9H568 366 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 AKIRIN1Q9H9L7 192 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 IL19Q9UHD0 177 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 ISY1Q9ULR0 285 aaKnown RBP4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 KCNK6Q9Y257 313 aa4.61□□□□□ -1.67
HMGB1P10-201ENST00000395823 IGLV5-45A0A087WSX0 123 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 SAA2-SAA4A0A096LPE2 208 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 LOC101059948A0A1B0GTJ6 334 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 SEC22BO75396 215 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 NGFRP08138 427 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 PCP11498 1178 aaKnown RBP4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 CD59P13987 128 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 EPHA2P29317 976 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 ALDH1B1P30837 517 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 GAS1P54826 345 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 CASP9P55211 416 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 CDH11P55287 796 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 SULT2A1Q06520 285 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 GAGE5Q13069 117 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 GAGE6Q13070 117 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 PHKG1Q16816 387 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 IFI44LQ53G44 452 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 C9orf57Q5W0N0 161 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 CAPRIN2Q6IMN6 1127 aaKnown RBP4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 C1orf186Q6ZWK4 172 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 TUBA1AQ71U36 451 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 C16orf82Q7Z2V1 217 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 CDK20Q8IZL9 346 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 PHLDA1Q8WV24 401 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 UBLCP1Q8WVY7 318 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 IL17FQ96PD4 163 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 TUBA1CQ9BQE3 449 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 SPXQ9BT56 116 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 LRRC1Q9BTT6 524 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 SLC39A8Q9C0K1 460 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 FKRPQ9H9S5 495 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 PRMT8Q9NR22 394 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 ANO10Q9NW15 660 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 PKD2L2Q9NZM6 624 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 RNF7Q9UBF6 113 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 SLC7A7Q9UM01 511 aa4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 RUVBL2Q9Y230 463 aaKnown RBP4.6□□□□□ -1.67
HMGB1P10-201ENST00000395823 A0A087X0K7 114 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 A0A1W2PN81 502 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 ANKRD61A6NGH8 418 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 TMEM150CB9EJG8 249 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 CRCPO75575 148 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 DDHD2O94830 711 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 ABHD2P08910 425 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 SP9P0CG40 484 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 F3P13726 295 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 CDH3P22223 829 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 SSTR1P30872 391 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 CHRNA7P36544 502 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 ZNF132P52740 706 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 AKAP17AQ02040 695 aaKnown RBP4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 GCNT1Q02742 428 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 KLC1Q07866 573 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 IL10RBQ08334 325 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 TRA2AQ13595 282 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 HERC3Q15034 1050 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 RBBP7Q16576 425 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 PM20D1Q6GTS8 502 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 KLHL10Q6JEL2 608 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 UNQ6126/PRO20091Q6UXV3 157 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 SIGLEC15Q6ZMC9 328 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 GPR141Q7Z602 305 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 RBM23Q86U06 439 aaKnown RBP4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 EXOC3L1Q86VI1 746 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 ZNF410Q86VK4 478 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 SPATA2LQ8IUW3 424 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 TDHQ8IZJ6 230 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 EID3Q8N140 333 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 OR52N5Q8NH56 324 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 PSMA8Q8TAA3 256 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 CKAP2Q8WWK9 683 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 FAM46BQ96A09 425 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 CDKN2AIPNLQ96HQ2 116 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 URM1Q9BTM9 101 aaKnown RBP4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 MIS12Q9H081 205 aa4.59□□□□□ -1.67
HMGB1P10-201ENST00000395823 SHARPINQ9H0F6 387 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms