RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF446Q9NWS9 450 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 LGALS13Q9UHV8 139 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 SERTAD3Q9UJW9 196 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 TLK1Q9UKI8 766 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 PLCL2Q9UPR0 1127 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 AHCTF1Q8WYP5 2266 aa15.89■□□□□ 0.13
CXCL1-201ENST00000395761 A0A087X1B8 175 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 IQANK1A0A1B0GTG1 560 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 OR2A25A4D2G3 310 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 NCF1BA6NI72 391 aaPredicted RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 NCF1CA8MVU1 366 aaPredicted RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 H3BMH7 237 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 H7BY64 318 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 SCRG1O75711 98 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 KRT37O76014 449 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 SNRPAP09012 282 aaKnown RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 LTA4HP09960 611 aaKnown RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 NCF1P14598 390 aaPredicted RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 NPPBP16860 134 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 TFEBP19484 476 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 MAGEA12P43365 314 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 ITGA1P56199 1179 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 CDKL1Q00532 357 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 TGFBIQ15582 683 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 ZNF425Q6IV72 752 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 CAPN13Q6MZZ7 669 aaPredicted RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 C19orf48Q6RUI8 117 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 C6orf15Q6UXA7 325 aaPredicted RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 FRA10AC1Q70Z53 315 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 TAOK1Q7L7X3 1001 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 ISCA2Q86U28 154 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 VASH2Q86V25 355 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 PAQR7Q86WK9 346 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 GPSM1Q86YR5 675 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 CACNA2D3Q8IZS8 1091 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 NLGN4XQ8N0W4 816 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 NLGN4YQ8NFZ3 816 aaPredicted RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 EPS8L3Q8TE67 593 aaKnown RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 ATL1Q8WXF7 558 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 N4BP2L2Q92802 583 aaPredicted RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 ISL2Q96A47 359 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 KIAA1191Q96A73 305 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 PRAP1Q96NZ9 151 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 OR4K3Q96R72 315 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 EGFL8Q99944 293 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 PLCD4Q9BRC7 762 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 ALG9Q9H6U8 611 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 SYNPO2LQ9H987 977 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 AKIRIN1Q9H9L7 192 aaPredicted RBP15.88■□□□□ 0.13
CXCL1-201ENST00000395761 NMRAL1Q9HBL8 299 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
CXCL1-201ENST00000395761 LAMA5O15230 3695 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 ANKRD12Q6UB98 2062 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 LOC105369274A0A096LPK9 316 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 LOC102723532A0A0G2JNH3 316 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 A0A0J9YVX5 310 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 TLDC2A0PJX2 215 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 AGPSO00116 658 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 OR2B3O76000 313 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 CCNDBP1O95273 360 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 ANXA5P08758 320 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 SLC26A3P40879 764 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 SLCO1A2P46721 670 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 ABATP80404 500 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 PTCHD3Q3KNS1 767 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 TAF1BQ53T94 588 aaPredicted RBP15.87■□□□□ 0.13
CXCL1-201ENST00000395761 CEP85LQ5SZL2 805 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 FRMPD2BQ6IN97 320 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 LCTLQ6UWM7 567 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 OR4N4Q8N0Y3 316 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 PLD6Q8N2A8 252 aaKnown RBP15.87■□□□□ 0.13
CXCL1-201ENST00000395761 MZB1Q8WU39 189 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 RHBDF1Q96CC6 855 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 GPR78Q96P69 363 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 PCBD2Q9H0N5 130 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 VPS11Q9H270 941 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 STARD5Q9NSY2 213 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 SNX7Q9UNH6 387 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 PCDHB3Q9Y5E6 796 aa15.87■□□□□ 0.13
CXCL1-201ENST00000395761 PCM1Q15154 2024 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 E7EQ34 232 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 TAPBPO15533 448 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 EFSO43281 561 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 ZNF749O43361 778 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 SASH3O75995 380 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 KLHL2O95198 593 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 CCND1P24385 295 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 GDF5P43026 501 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 GLRBP48167 497 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 ATP1A2P50993 1020 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 KRT71Q3SY84 523 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 FBXO48Q5FWF7 155 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 TNFAIP8L3Q5GJ75 292 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 ZC3H12BQ5HYM0 836 aaKnown RBP15.86■□□□□ 0.13
CXCL1-201ENST00000395761 RNF44Q7L0R7 432 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 ADCK2Q7Z695 626 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 CCDC91Q7Z6B0 441 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 PLD3Q8IV08 490 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 GPR135Q8IZ08 494 aa15.86■□□□□ 0.13
CXCL1-201ENST00000395761 CYP4X1Q8N118 509 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms