RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ZNF691Q5VV52 312 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CPZQ66K79 652 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 C16orf87Q6PH81 154 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 CRTC3Q6UUV7 619 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 DPY19L3Q6ZPD9 716 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 MRPL43Q8N983 215 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 COPS8Q99627 209 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 RASSF1Q9NS23 344 aa13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 ZNF106Q9H2Y7 1883 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-201ENST00000394456 A0A096LPI6 279 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 FAM220BPB1ANY3 271 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 BCKDKO14874 412 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 TLL1O43897 1013 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 NOL3O60936 208 aaKnown RBP13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 MOSPD3O75425 235 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ETHE1O95571 254 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 HPRP00739 348 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 KRT6AP02538 564 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 KRT6BP04259 564 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 TNFRSF1BP20333 461 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 KRT6CP48668 564 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ITGADQ13349 1161 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 DGCR6Q14129 220 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 UGT8Q16880 541 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ZNF829Q3KNS6 432 aaPredicted RBP13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 RBM48Q5RL73 367 aaKnown RBP13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 CCDC81Q6ZN84 652 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 CYP2U1Q7Z449 544 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 B3GNT8Q7Z7M8 397 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 EID3Q8N140 333 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 GLB1L3Q8NCI6 653 aaPredicted RBP13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 MAL2Q969L2 176 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 MUL1Q969V5 352 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 KCNH6Q9H252 994 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM45AQ9NWC5 275 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 KCTD5Q9NXV2 234 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ZDHHC3Q9NYG2 299 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 B4GALT6Q9UBX8 382 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 BAG5Q9UL15 447 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 PSME2Q9UL46 239 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 XIRP2A4UGR9 3374 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 RHOP08100 348 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 EPCAMP16422 314 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ENGP17813 658 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 FUT4P22083 530 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 TTKP33981 857 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 NSG1P42857 185 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 MASP1P48740 699 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 TMBIM6P55061 237 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 MAD2L1Q13257 205 aaPredicted RBP13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 NR1D2Q14995 579 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 CTF1Q16619 201 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 LRIF1Q5T3J3 769 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ATG9BQ674R7 924 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 GRAMD4Q6IC98 578 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ZNF621Q6ZSS3 439 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 Q6ZVU0 165 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 IGFN1Q86VF2 1251 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 CCDC71Q8IV32 467 aaPredicted RBP13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 CENPSQ8N2Z9 138 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ABHD11Q8NFV4 315 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 NDNFQ8TB73 568 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 FAR1Q8WVX9 515 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 SORCS1Q8WY21 1168 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 ING5Q8WYH8 240 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 BORCS5Q969J3 196 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 LMLNQ96KR4 655 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 SAMD11Q96NU1 681 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 NODALQ96S42 347 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 TUBA1CQ9BQE3 449 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 USE1Q9NZ43 259 aa13.07□□□□□ -0.32
GTF2F1-201ENST00000394456 SOCS5O75159 536 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 RETP07949 1114 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 ACPPP15309 386 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 AMD1P17707 334 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 IGFBP5P24593 272 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 WEE1P30291 646 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 WNT3P56703 355 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 SNRPD1P62314 119 aaKnown RBP13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 ABRQ12979 859 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 CHIT1Q13231 466 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM236Q5W0B7 351 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 NOXRED1Q6NXP6 359 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 DCDC5Q6ZRR9 648 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 ADHFE1Q8IWW8 467 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 MCOLN3Q8TDD5 553 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 RDH14Q9HBH5 336 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 GMEB1Q9Y692 573 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 PLXNB3Q9ULL4 1909 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 TRANK1O15050 2925 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 C16orf96A6NNT2 1141 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 LAMP1P11279 417 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 CRYBA2P53672 197 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 CYP27C1Q4G0S4 372 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 PDE12Q6L8Q7 609 aaKnown RBP13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 ZNF554Q86TJ5 538 aa13.06□□□□□ -0.32
GTF2F1-201ENST00000394456 PTOV1Q86YD1 416 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms