RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 FAM234BA2RU67 622 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 RGS10O43665 173 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 SEMA3DO95025 777 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 GOT2P00505 430 aaKnown RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 HNRNPA1P09651 372 aaKnown RBP eCLIP10.83□□□□□ -0.68
CUX1-204ENST00000393824 ALOX12P18054 663 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 TACR2P21452 398 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 PKLRP30613 574 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 LTBRP36941 435 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 PPP3CCP48454 512 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 CLK1P49759 484 aaKnown RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 SLC7A9P82251 487 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 KEAP1Q14145 624 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 NKG7Q16617 165 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 TYSND1Q2T9J0 566 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 TJAP1Q5JTD0 557 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 NEK5Q6P3R8 708 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 Q6ZNB5 142 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 GATAD2AQ86YP4 633 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 EID3Q8N140 333 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 FAM86B1Q8N7N1 296 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 RHEBL1Q8TAI7 183 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 WFDC5Q8TCV5 224 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 JPH3Q8WXH2 748 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 MRGPRX2Q96LB1 330 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 RPRD1AQ96P16 312 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 CDADC1Q9BWV3 514 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 C6orf62Q9GZU0 229 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 LMAN2LQ9H0V9 348 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 MIR1-1HGQ9H1L0 117 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 NSUN3Q9H649 340 aaKnown RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 POLR3BQ9NW08 1133 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 ADPRHL2Q9NX46 363 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 ERVW-1Q9UQF0 538 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 MTCH2Q9Y6C9 303 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 ZFP37Q9Y6Q3 630 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 SHROOM3Q8TF72 1996 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 MYOFQ9NZM1 2061 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 DNAH14Q0VDD8 3507 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 A0A0D9SEW6 157 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 PNMA8CA0A1B0GUJ8 204 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 ERVH48-1M5A8F1 160 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 LEFTY2O00292 366 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 ARNTLO00327 626 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 GNGT2O14610 69 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 CAPN5O15484 640 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 MAFKO60675 156 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 FTH1P02794 183 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 SLC2A3P11169 496 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 CTRB1P17538 263 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 FMO3P31513 532 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 NUDT1P36639 197 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 VIPR2P41587 438 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 CASP2P42575 452 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 MLLT1Q03111 559 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 GPR50Q13585 617 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 STARD3Q14849 445 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 CTRB2Q6GPI1 263 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 LAIR1Q6GTX8 287 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 CAPN13Q6MZZ7 669 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 CILP2Q8IUL8 1156 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 SYTL1Q8IYJ3 562 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 PTGR2Q8N8N7 351 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 SH3RF2Q8TEC5 729 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 FATE1Q969F0 183 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 PTERQ96BW5 349 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 RMDN1Q96DB5 314 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 RNF170Q96K19 258 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 ZNF583Q96ND8 569 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 KCNA7Q96RP8 456 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 SLC39A8Q9C0K1 460 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 LINC00597Q9H2U6 94 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 MFSD1Q9H3U5 465 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 CATSPERBQ9H7T0 1116 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 ZBTB20Q9HC78 741 aaPredicted RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 ATP13A1Q9HD20 1204 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 STMN3Q9NZ72 180 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 EHD3Q9NZN3 535 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 MRPS23Q9Y3D9 190 aaKnown RBP10.83□□□□□ -0.68
CUX1-204ENST00000393824 ORC6Q9Y5N6 252 aa10.83□□□□□ -0.68
CUX1-204ENST00000393824 DOCK4Q8N1I0 1966 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 DSCR3O14972 297 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 AIREO43918 545 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 TSPAN9O75954 239 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 FADS2O95864 444 aaKnown RBP10.82□□□□□ -0.68
CUX1-204ENST00000393824 GBX1Q14549 363 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 ENPP6Q6UWR7 440 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 Q7L0L9 218 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 TMEM179BQ7Z7N9 219 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 ZFAND4Q86XD8 727 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 HIPK1Q86Z02 1210 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 MICU2Q8IYU8 434 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 RTL3Q8N8U3 475 aaKnown RBP10.82□□□□□ -0.68
CUX1-204ENST00000393824 PROKR1Q8TCW9 393 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 PEX13Q92968 403 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 RHBDF1Q96CC6 855 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 NUSAP1Q9BXS6 441 aaKnown RBP10.82□□□□□ -0.68
CUX1-204ENST00000393824 ITPAQ9BY32 194 aa10.82□□□□□ -0.68
CUX1-204ENST00000393824 REXO4Q9GZR2 422 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms