RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 WASHC1A8K0Z3 465 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 B4DXG7 233 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 MMP20O60882 483 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 RASAL1O95294 804 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 TSPAN12O95859 305 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 CNPP09543 421 aaKnown RBP11.11□□□□□ -0.63
LAMB1-203ENST00000393560 GLRA2P23416 452 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 SSTR2P30874 369 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 ADH7P40394 386 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 PTGFRP43088 359 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 RPS9P46781 194 aaKnown RBP11.11□□□□□ -0.63
LAMB1-203ENST00000393560 ZNF543Q08ER8 600 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 PRPSAP1Q14558 356 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 ATP6AP1Q15904 470 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 SV2AQ7L0J3 742 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 IFNEQ86WN2 208 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 OR10H5Q8NGA6 315 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 OR8D4Q8NGM9 314 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 KAT5Q92993 513 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 REPS1Q96D71 796 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 JAM3Q9BX67 310 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 RNF121Q9H920 327 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 UNKLQ9H9P5 680 aaKnown RBP11.11□□□□□ -0.63
LAMB1-203ENST00000393560 PDE10AQ9Y233 779 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 CA5BQ9Y2D0 317 aa11.11□□□□□ -0.63
LAMB1-203ENST00000393560 TCRBV3S1A0A5B6 114 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 E9PI62 339 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 H0YCG3 227 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SULT1C2O00338 296 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 TOX3O15405 576 aaPredicted RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 LCMT2O60294 686 aaKnown RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 TBC1D4O60343 1298 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 BPGMP07738 259 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 PCMT1P22061 227 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 HLA-DMAP28067 261 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 MPIP34949 423 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SLC1A6P48664 564 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 EMX1Q04741 257 aaPredicted RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 RBM48Q5RL73 367 aaKnown RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 DLEU7Q6UYE1 221 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 GALNT5Q7Z7M9 940 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SERINC5Q86VE9 423 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 NUDT13Q86X67 352 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 CBARPQ8N350 705 aaPredicted RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 NLGN4YQ8NFZ3 816 aaPredicted RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 OR2L5Q8NG80 312 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SETD6Q8TBK2 473 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 IFI44Q8TCB0 444 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 MISP3Q96FF7 219 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 MBOAT7Q96N66 472 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SORT1Q99523 831 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ACO2Q99798 780 aaKnown RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 BRINP2Q9C0B6 783 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 METTL9Q9H1A3 318 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ACSS3Q9H6R3 686 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 RIOX1Q9H6W3 641 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SPON1Q9HCB6 807 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 CHRAC1Q9NRG0 131 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 PNMA8CA0A1B0GUJ8 204 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 FABP7O15540 132 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SELENOFO60613 162 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 PGLSO95336 258 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 INHBAP08476 426 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 AZGP1P25311 298 aaKnown RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ATP5A1P25705 553 aaKnown RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 NOVP48745 357 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 CDH4P55283 916 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ADARB1P78563 741 aaKnown RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 MAT1AQ00266 395 aaKnown RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ORC2Q13416 577 aaPredicted RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ENOSF1Q7L5Y1 443 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ANKRD46Q86W74 232 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 VWA5B2Q8N398 1253 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SVOPLQ8N434 492 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 AP2M1Q96CW1 435 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ATG4CQ96DT6 458 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 YIPF6Q96EC8 236 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 LRRC46Q96FV0 321 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 COL21A1Q96P44 957 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SORCS2Q96PQ0 1159 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 AGAP2Q99490 1192 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 VAT1Q99536 393 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 RASSF1Q9NS23 344 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 SAGE1Q9NXZ1 904 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 RCOR3Q9P2K3 495 aaPredicted RBP11.1□□□□□ -0.63
LAMB1-203ENST00000393560 RAPGEFL1Q9UHV5 662 aa11.1□□□□□ -0.63
LAMB1-203ENST00000393560 ADAM12O43184 909 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 MPC2O95563 127 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 H2AFB1P0C5Y9 115 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 H2AFB2P0C5Z0 115 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 YBX3P16989 372 aaKnown RBP eCLIP11.09□□□□□ -0.638e-8■■■■■ 28.6
LAMB1-203ENST00000393560 MEP1AQ16819 746 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 TATDN3Q17R31 274 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 COL28A1Q2UY09 1125 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 ASPRV1Q53RT3 343 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 LIPJQ5W064 366 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 GLYATQ6IB77 296 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 CES5AQ6NT32 575 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 TMEM88Q6PEY1 159 aa11.09□□□□□ -0.63
LAMB1-203ENST00000393560 DEGS2Q6QHC5 323 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms