RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TSTQ16762 297 aaKnown RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 ASB18Q6ZVZ8 466 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 GALNTL5Q7Z4T8 443 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 OR8H3Q8N146 312 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 C1orf216Q8TAB5 229 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 FKBP7Q9Y680 259 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 KIF1AQ12756 1690 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ZNF487B1APH4 448 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ZBTB48P10074 688 aaPredicted RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 PEPDP12955 493 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ACADLP28330 430 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 MAZP56270 477 aaKnown RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 CAMK1Q14012 370 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ZNF678Q5SXM1 525 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 CDHR3Q6ZTQ4 885 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ADGRG6Q86SQ4 1221 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 C2CD4AQ8NCU7 369 aaPredicted RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 TSPEARQ8WU66 669 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 CCDC106Q9BWC9 280 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 PLEKHA1Q9HB21 404 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 EVA1BQ9NVM1 165 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 FAM120CQ9NX05 1096 aaKnown RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 MARK1Q9P0L2 795 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 SLC31A1O15431 190 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 HCRTO43612 131 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 XPNPEP2O43895 674 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 GMFGO60234 142 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 KCNE1P15382 129 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ZNF182P17025 639 aaPredicted RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 ACADVLP49748 655 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 GBX2P52951 348 aaPredicted RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 SCRN3Q0VDG4 424 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 PTCHD3Q3KNS1 767 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 TTLQ8NG68 377 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 HSH2DQ96JZ2 352 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 CCSER2Q9H7U1 834 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 MED31Q9Y3C7 131 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 URB1O60287 2271 aaKnown RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 MYH10P35580 1976 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 PRSS51A0A1B0GVH4 220 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ALDOAP04075 364 aaKnown RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 EBLN1P0CF75 366 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 HSD17B2P37059 387 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ATP4BP51164 291 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 DIO3P55073 304 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ZNF280AP59817 542 aaPredicted RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 SERINC3Q13530 473 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 TGFBIQ15582 683 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ZNF517Q6ZMY9 492 aaPredicted RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 QSOX2Q6ZRP7 698 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ARMCX6Q7L4S7 300 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 OSTM1Q86WC4 334 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ATP6V1C2Q8NEY4 427 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 OR2AP1Q8NGE2 309 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ING5Q8WYH8 240 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 ARMC5Q96C12 935 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 SMOQ99835 787 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 TAPBPLQ9BX59 468 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 CST11Q9H112 138 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 RC3H2Q9HBD1 1191 aaKnown RBP12.79□□□□□ -0.36
LCA5-202ENST00000392959 MED11Q9P086 117 aa12.79□□□□□ -0.36
LCA5-202ENST00000392959 TPD52L2O43399 206 aaKnown RBP12.78□□□□□ -0.36
LCA5-202ENST00000392959 B3GALT2O43825 422 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 CAPN15O75808 1086 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 ITIH1P19827 911 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 CCR8P51685 355 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 KCNQ1P51787 676 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 PRAMEF14Q5SWL7 426 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 KIAA1614Q5VZ46 1190 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 PAMR1Q6UXH9 720 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 PRR23CQ6ZRP0 262 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 GET4Q7L5D6 327 aaPredicted RBP12.78□□□□□ -0.36
LCA5-202ENST00000392959 NXPE1Q8N323 547 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 SLC45A3Q96JT2 553 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 YIPF4Q9BSR8 244 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 RAB11FIP5Q9BXF6 653 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 UCK2Q9BZX2 261 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 ADAM7Q9H2U9 754 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 SRMSQ9H3Y6 488 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 MRPS30Q9NP92 439 aaKnown RBP12.78□□□□□ -0.36
LCA5-202ENST00000392959 TNFRSF10DQ9UBN6 386 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 TSPAN4O14817 238 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 DCLK1O15075 740 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 RBMXL2O75526 392 aaKnown RBP12.78□□□□□ -0.36
LCA5-202ENST00000392959 ZNF823P16415 610 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 SMSP52788 366 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 CREB5Q02930 508 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 IQCF2Q8IXL9 164 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 LINC00471Q8N535 108 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 SLC7A6OSQ96CW6 309 aaPredicted RBP12.78□□□□□ -0.36
LCA5-202ENST00000392959 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 RIOK2Q9BVS4 552 aaKnown RBP12.78□□□□□ -0.36
LCA5-202ENST00000392959 DPEP2Q9H4A9 486 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 MKKSQ9NPJ1 570 aaPredicted RBP12.78□□□□□ -0.36
LCA5-202ENST00000392959 RNF6Q9Y252 685 aa12.78□□□□□ -0.36
LCA5-202ENST00000392959 SDHDO14521 159 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms