RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TARM1B6A8C7 271 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 ATG13O75143 517 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 ECI2O75521 394 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 LYPLA1O75608 230 aaPredicted RBP18.45■□□□□ 0.54
CCDC50-202ENST00000392456 S100A6P06703 90 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 WASP42768 502 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 NFATC2Q13469 925 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 CEACAM7Q14002 265 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 AAK1Q2M2I8 961 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 ZNF805Q5CZA5 627 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 CTSL3PQ5NE16 218 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 BRAT1Q6PJG6 821 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 SERPINA13PQ6UXR4 307 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 NAPRTQ6XQN6 538 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 CDRT15Q96T59 188 aa18.45■□□□□ 0.54
CCDC50-202ENST00000392456 SCN8AQ9UQD0 1980 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 KPNA3O00505 521 aaPredicted RBP18.44■□□□□ 0.54
CCDC50-202ENST00000392456 TOR1BO14657 336 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 ACOT8O14734 319 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 NIPSNAP2O75323 286 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 BCAS1O75363 584 aaPredicted RBP18.44■□□□□ 0.54
CCDC50-202ENST00000392456 SEMA3DO95025 777 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 KCNC1P48547 511 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 BLVRAP53004 296 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 CACNG1Q06432 222 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 TRAP1Q12931 704 aaKnown RBP18.44■□□□□ 0.54
CCDC50-202ENST00000392456 HTR4Q13639 388 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 EIF4HQ15056 248 aaKnown RBP18.44■□□□□ 0.54
CCDC50-202ENST00000392456 ITPRIPL2Q3MIP1 535 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 TXNDC11Q6PKC3 985 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 C16orf89Q6UX73 402 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 PARS2Q7L3T8 475 aaKnown RBP18.44■□□□□ 0.54
CCDC50-202ENST00000392456 SUSD6Q92537 303 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 LRCH3Q96II8 777 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 SCYL1Q96KG9 808 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 COQ3Q9NZJ6 369 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 XPR1Q9UBH6 696 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 ANKRD6Q9Y2G4 727 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 GLYATL1P3A0A0U1RQE8 302 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 GRXCR2A6NFK2 248 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 LEUTXA8MZ59 168 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 NME5P56597 212 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 LRRC8EQ6NSJ5 796 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 FAM45BPQ6NSW5 357 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 MAVSQ7Z434 540 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 HSD11B1LQ7Z5J1 315 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 SERPINA9Q86WD7 417 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 CLDN19Q8N6F1 224 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 MFSD2AQ8NA29 543 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 FAM45AQ8TCE6 357 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 SCAMP4Q969E2 229 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 PBXIP1Q96AQ6 731 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 TSNARE1Q96NA8 513 aa18.44■□□□□ 0.54
CCDC50-202ENST00000392456 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.44■□□□□ 0.54
CCDC50-202ENST00000392456 DENND4AQ7Z401 1863 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 DLGAP1O14490 977 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 TTPAP49638 278 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 HLCSP50747 726 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 POLR2LP62875 67 aaKnown RBP18.43■□□□□ 0.54
CCDC50-202ENST00000392456 CCDC85BQ15834 202 aaPredicted RBP18.43■□□□□ 0.54
CCDC50-202ENST00000392456 PLA2G4EQ3MJ16 856 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 IER5LQ5T953 404 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.43■□□□□ 0.54
CCDC50-202ENST00000392456 SLCO6A1Q86UG4 719 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 GATAD2AQ86YP4 633 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 IL17RDQ8NFM7 739 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 CDC26Q8NHZ8 85 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 OPALINQ96PE5 141 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 MUC22E2RYF6 1773 aaPredicted RBP18.43■□□□□ 0.54
CCDC50-202ENST00000392456 NEMP2A6NFY4 417 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 IDH3AP50213 366 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 PPP5CP53041 499 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 ATXN3P54252 364 aaPredicted RBP18.43■□□□□ 0.54
CCDC50-202ENST00000392456 PAGE2BQ5JRK9 111 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 PAQR3Q6TCH7 311 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 ZNF704Q6ZNC4 412 aaPredicted RBP18.43■□□□□ 0.54
CCDC50-202ENST00000392456 ZBTB49Q6ZSB9 765 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 PNPT1Q8TCS8 783 aaKnown RBP18.43■□□□□ 0.54
CCDC50-202ENST00000392456 FKBP10Q96AY3 582 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 RNF170Q96K19 258 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 PRSS21Q9Y6M0 314 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 KIAA1549LQ6ZVL6 1849 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 MYO10Q9HD67 2058 aa18.43■□□□□ 0.54
CCDC50-202ENST00000392456 A0A087X1B8 175 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 UPK3BL1B0FP48 263 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 UPK3BL2E5RIL1 263 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 H3BMM5 538 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 SPINT1O43278 529 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 UPK1BO75841 260 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 POU3F3P20264 500 aaPredicted RBP18.42■□□□□ 0.54
CCDC50-202ENST00000392456 SPAM1P38567 509 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 EIF2DP41214 584 aaKnown RBP18.42■□□□□ 0.54
CCDC50-202ENST00000392456 PTPN5P54829 565 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 PON2Q15165 354 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 ATP13A5Q4VNC0 1218 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 ZNF544Q6NX49 715 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 Q6ZVL8 140 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 CACUL1Q86Y37 369 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 OR6Q1Q8NGQ2 317 aa18.42■□□□□ 0.54
CCDC50-202ENST00000392456 GTF2H4Q92759 462 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms