RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CHRFAM7AQ494W8 412 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 SLC37A3Q8NCC5 494 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 EPS8L1Q8TE68 723 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 ASB6Q9NWX5 421 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 KNTC1P50748 2209 aa14.4□□□□□ -0.1
CCDC50-201ENST00000392455 ANXA4P09525 319 aaPredicted RBP14.4□□□□□ -0.11
CCDC50-201ENST00000392455 ALAS2P22557 587 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 BMP8BP34820 402 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 THBS3P49746 956 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 CASP6P55212 293 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 TAS2R31P59538 309 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 TARDBPQ13148 414 aaKnown RBP eCLIP14.4□□□□□ -0.11
CCDC50-201ENST00000392455 LRRC66Q68CR7 880 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 BMP8AQ7Z5Y6 402 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 RNF157Q96PX1 679 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 BTBD2Q9BX70 525 aa14.4□□□□□ -0.11
CCDC50-201ENST00000392455 MYO5BQ9ULV0 1848 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 RTCAO00442 366 aaKnown RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 GPX6P59796 221 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CTBP1Q13363 440 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TMEM110Q86TL2 294 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 YIPF7Q8N8F6 280 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 LRRN4CLQ8ND94 238 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 ABHD5Q8WTS1 349 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 SNAPC3Q92966 411 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 C11orf16Q9NQ32 467 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 DNAJB9Q9UBS3 223 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 HIF3AQ9Y2N7 669 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 A0A1B0GVI7 797 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 SULT1C2O00338 296 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CLN5O75503 358 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 DSG2Q14126 1118 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 GPR142Q7Z601 462 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CREG2Q8IUH2 290 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 C12orf50Q8NA57 414 aaPredicted RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 BPIFB1Q8TDL5 484 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 FAM86C1Q9NVL1 165 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 SLC7A8Q9UHI5 535 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 FBXO5Q9UKT4 447 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 ICKQ9UPZ9 632 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 DERAQ9Y315 318 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 RAC2P15153 192 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 UQCRC1P31930 480 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 DBPQ10586 325 aaPredicted RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 MINDY4Q4G0A6 757 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 OR6K2Q8NGY2 324 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 HAVCR2Q8TDQ0 301 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 JSRP1Q96MG2 331 aaPredicted RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CD180Q99467 661 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 BTBD1Q9H0C5 482 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 BRF2Q9HAW0 419 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 ERVK-18Q9QC07 812 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3DA0A087WVF3 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3IA0A087WXS9 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3EA0A087X179 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3KA0A087X1G2 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3FA6NER0 549 aaPredicted RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3LB9A6J9 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CXCL14O95715 111 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3HP0C7X1 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 EPHA3P29320 983 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 PSMA6P60900 246 aaKnown RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 MPP1Q00013 466 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 SEMA5AQ13591 1074 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TARBP2Q15633 366 aaKnown RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3GQ6DHY5 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3CQ6IPX1 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TBC1D3Q8IZP1 549 aaPredicted RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 BTN2A3PQ96KV6 586 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 MTMR9Q96QG7 549 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CENPOQ9BU64 300 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 NPEPPSL1A6NEC2 478 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CYP11A1P05108 521 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 ACTC1P68032 377 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 ACTA1P68133 377 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 RALGPS1Q5JS13 557 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 JAGN1Q8N5M9 183 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CCDC71LQ8N9Z2 235 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 C7orf26Q96N11 449 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF705EA8MWA4 302 aaPredicted RBP14.39□□□□□ -0.11
CCDC50-201ENST00000392455 CDH11P55287 796 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 DACT2Q5SW24 774 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 TOR1AIP2Q8NFQ8 470 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
CCDC50-201ENST00000392455 C2orf74A8MZ97 194 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 IFI30P13284 250 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 AHCYP23526 432 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 VSX2P58304 361 aaPredicted RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 CRB2Q5IJ48 1285 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 CCDC71Q8IV32 467 aaPredicted RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 ZDHHC21Q8IVQ6 265 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 MAPK15Q8TD08 544 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 CADM1Q9BY67 442 aaKnown RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 ITM2CQ9NQX7 267 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 COMMD3Q9UBI1 195 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 LAMP5Q9UJQ1 280 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 TIMM8BQ9Y5J9 83 aaPredicted RBP14.38□□□□□ -0.11
CCDC50-201ENST00000392455 GLYATL1P3A0A0U1RQE8 302 aa14.38□□□□□ -0.11
CCDC50-201ENST00000392455 A8MVJ9 347 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms