RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 SIX5Q8N196 739 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 NLGN1Q8N2Q7 840 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 VWA5B2Q8N398 1253 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CARNMT1Q8N4J0 409 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CHCHD4Q8N4Q1 142 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 ATPAF2Q8N5M1 289 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 KRTCAP2Q8N6L1 136 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 C1orf52Q8N6N3 182 aaKnown RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 TOP6BLQ8N6T0 577 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 AMER2Q8N7J2 671 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 RTL3Q8N8U3 475 aaKnown RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SLC43A3Q8NBI5 491 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 ARRDC4Q8NCT1 418 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF540Q8NDQ6 660 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 APPL2Q8NEU8 664 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 OR6B3Q8NGW1 331 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CD200R1Q8TD46 325 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 BRSK1Q8TDC3 778 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 GPR152Q8TDT2 470 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 UBTD2Q8WUN7 234 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 USP7Q93009 1102 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 KIAA1143Q96AT1 154 aaPredicted RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SH3KBP1Q96B97 665 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 KLRG1Q96E93 195 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SLC10A4Q96EP9 437 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CEP295NLQ96MC4 621 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SAMD11Q96NU1 681 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 COL21A1Q96P44 957 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 PPP1R2P1Q96PQ5 205 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 VPS35Q96QK1 796 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 OR5M11Q96RB7 305 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 APOL4Q9BPW4 351 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SLC30A2Q9BRI3 323 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 INPP5KQ9BT40 448 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 TTPALQ9BTX7 342 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CDCA4Q9BXL8 241 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CCDC90BQ9GZT6 254 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 C6orf62Q9GZU0 229 aaPredicted RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 KATNBL1Q9H079 304 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 TKTL2Q9H0I9 626 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 MMP28Q9H239 520 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 ABHD16BQ9H3Z7 469 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 NXF3Q9H4D5 531 aaKnown RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 RIBC2Q9H4K1 309 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 PPP1R3EQ9H7J1 279 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF556Q9HAH1 456 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 RRAGCQ9HB90 399 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 PDFQ9HBH1 243 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CSNK1G1Q9HCP0 422 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 B3GAT2Q9NPZ5 323 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 TIGARQ9NQ88 270 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 RAD18Q9NS91 495 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 TRMT13Q9NUP7 481 aaKnown RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 DDIT4Q9NX09 232 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 ERVK13-1Q9NX77 482 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 ELOVL2Q9NXB9 296 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SCN3BQ9NY72 215 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 ABI2Q9NYB9 513 aaPredicted RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 HOXC10Q9NYD6 342 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 KCMF1Q9P0J7 381 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 COX16Q9P0S2 106 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SH3BP4Q9P0V3 963 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 FNIP2Q9P278 1114 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 FTSJ1Q9UET6 329 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 OR12D3Q9UGF7 316 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 LIMD1Q9UGP4 676 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 NDOR1Q9UHB4 597 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 MOSPD1Q9UJG1 213 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 NUP50Q9UKX7 468 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 PPT2Q9UMR5 302 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 UBQLN1Q9UMX0 589 aaKnown RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SNX7Q9UNH6 387 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 SCAF8Q9UPN6 1271 aaKnown RBP3.35□□□□□ -1.87
TRAV39-201ENST00000390466 CFL2Q9Y281 166 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 TLR6Q9Y2C9 796 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 DLGAP4Q9Y2H0 992 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 AP3M1Q9Y2T2 418 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 PCDHGB3Q9Y5G1 929 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 GMPPBQ9Y5P6 360 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 RNF215Q9Y6U7 377 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 COL4A6Q14031 1691 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 COL4A2P08572 1712 aa3.35□□□□□ -1.87
TRAV39-201ENST00000390466 MPDZO75970 2070 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 IGLV3-10A0A075B6K4 115 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 PNMA8CA0A1B0GUJ8 204 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KRT87PA6NCN2 255 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 A8MVJ9 347 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FAM25AB3EWG3 89 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FAM25CB3EWG5 89 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FAM25GB3EWG6 89 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 C19orf81C9J6K1 198 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF670-ZNF695F2Z2N8 137 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 G3V3G9 751 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FZD9O00144 591 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 PTGESO14684 152 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CD3EAPO15446 510 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FGF10O15520 208 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TAPBPO15533 448 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SMAD6O43541 496 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TMCC2O75069 709 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms