RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 SAP25Q8TEE9 199 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 SEPT1Q8WYJ6 367 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 TEKT1Q969V4 418 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 NSL1Q96IY1 281 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 MAP3K3Q99759 626 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 PI4K2AQ9BTU6 479 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 ZNF350Q9GZX5 532 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 LSG1Q9H089 658 aaKnown RBP4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 RIMS4Q9H426 269 aaPredicted RBP4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 TRPV4Q9HBA0 871 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 SIX2Q9NPC8 291 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 IARS2Q9NSE4 1012 aaKnown RBP4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 MTRRQ9UBK8 725 aa4.13□□□□□ -1.75
RNU6-549P-201ENST00000384433 A0A1W2PRV1 198 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 TRIM64A6NGJ6 449 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 TRIM64BA6NI03 449 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 C17orf105B2RV13 164 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 F8VVB4 439 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 F8VWA3 439 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 SLC33A1O00400 549 aaPredicted RBP4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 LMX1BO60663 402 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 KINO60870 393 aaKnown RBP4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 APOHP02749 345 aaPredicted RBP4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 CD48P09326 243 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 HMOX1P09601 288 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 MYL6BP14649 208 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 ATP6V1B1P15313 513 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 PAX1P15863 534 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 LHCGRP22888 699 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 SSTR1P30872 391 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 SOAT1P35610 550 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 ST8SIA6P61647 398 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 LASP1Q14847 261 aaKnown RBP4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 SMU1Q2TAY7 513 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 TWISTNBQ3B726 338 aaPredicted RBP4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 SLC35D3Q5M8T2 416 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 KIAA1161Q6NSJ0 714 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 PLBD1Q6P4A8 553 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 MARK2Q7KZI7 788 aaKnown RBP4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 SLC16A9Q7RTY1 509 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 C5orf24Q7Z6I8 188 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 AMIGO1Q86WK6 493 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 CROCCP3Q8IVE0 287 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 RYBPQ8N488 228 aaPredicted RBP4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 MSANTD4Q8NCY6 345 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 ZNF524Q96C55 264 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 CABS1Q96KC9 395 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 KLHL5Q96PQ7 755 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 ACTL8Q9H568 366 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 SRD5A3Q9H8P0 318 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 SDF2L1Q9HCN8 221 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 DNAJC17Q9NVM6 304 aaKnown RBP4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 PKD2L2Q9NZM6 624 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 KCNG2Q9UJ96 466 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 GMEB2Q9UKD1 530 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 R4GN57 208 aa4.12□□□□□ -1.75
RNU6-549P-201ENST00000384433 TRBV5-5A0A0J9YX44 114 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 BMPR1BO00238 502 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 FGF17O60258 216 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 SLC22A3O75751 556 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 GH1P01241 217 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 GPIP06744 558 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 EPORP19235 508 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 SERPINB6P35237 376 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 MAGEB1P43366 347 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 ALDH3A2P51648 485 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 RPL36AP83881 106 aaKnown RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 CACNG1Q06432 222 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 KLC1Q07866 573 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 ACTN3Q08043 901 aaPredicted RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 TRAP1Q12931 704 aaKnown RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 GPR17Q13304 367 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 ZRSR1Q15695 479 aaKnown RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 OR4C11Q6IEV9 310 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 ZNF770Q6IQ21 691 aaPredicted RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 UGT3A1Q6NUS8 523 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 CTR9Q6PD62 1173 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 NDUFAF2Q8N183 169 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 NOA1Q8NC60 698 aaKnown RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 KIAA0895Q8NCT3 520 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 NCOA7Q8NI08 942 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 MGARPQ8TDB4 240 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 LRRC8CQ8TDW0 803 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 AFAP1L1Q8TED9 768 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 HPSE2Q8WWQ2 592 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 SNX21Q969T3 373 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 PGM2Q96G03 612 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 RBM41Q96IZ5 413 aaKnown RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 CTAGE1Q96RT6 745 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 CDK19Q9BWU1 502 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 ACPTQ9BZG2 426 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 MMP28Q9H239 520 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 ECHDC1Q9NTX5 307 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 FAM118AQ9NWS6 357 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 VPS18Q9P253 973 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 GPR132Q9UNW8 380 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 RUVBL2Q9Y230 463 aaKnown RBP4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 CHKBQ9Y259 395 aa4.11□□□□□ -1.75
RNU6-549P-201ENST00000384433 ACEP12821 1306 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms