RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 FAM172BPA6NC97 362 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 AGAP5A6NIR3 686 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 EFCAB9A8MZ26 197 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 CENPBD1B2RD01 187 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 BTN3A1O00481 513 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 PRAMEF12O95522 483 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 KRT75O95678 551 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 TRBC1P01850 177 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 IL6P05231 212 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 PKMP14618 531 aaKnown RBP8.69□□□□□ -1.02
GPNMB-202ENST00000381990 SYN1P17600 705 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 SERPINA4P29622 427 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 MAGEA2P43356 314 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 CDKN1CP49918 316 aaPredicted RBP8.69□□□□□ -1.02
GPNMB-202ENST00000381990 NCS1P62166 190 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 SNRPD1P62314 119 aaKnown RBP8.69□□□□□ -1.02
GPNMB-202ENST00000381990 CACNG1Q06432 222 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 KIAA0040Q15053 153 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 PTPRNQ16849 979 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 LRIT3Q3SXY7 679 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 PRSS36Q5K4E3 855 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 ATG9BQ674R7 924 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 SPRED2Q7Z698 418 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 TSPYL5Q86VY4 417 aaPredicted RBP8.69□□□□□ -1.02
GPNMB-202ENST00000381990 HS3ST5Q8IZT8 346 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 PAF1Q8N7H5 531 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 AMER2Q8N7J2 671 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 OR10A6Q8NH74 314 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 IRF7Q92985 503 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 BBS2Q9BXC9 721 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 TNKS2Q9H2K2 1166 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 SIAEQ9HAT2 523 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 ERVK-18Q9QC07 812 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 GALPQ9UBC7 116 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 MED16Q9Y2X0 877 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 TNPO3Q9Y5L0 923 aaKnown RBP8.69□□□□□ -1.02
GPNMB-202ENST00000381990 COMMD10Q9Y6G5 202 aa8.69□□□□□ -1.02
GPNMB-202ENST00000381990 LAMA2P24043 3122 aaKnown RBP8.69□□□□□ -1.02
GPNMB-202ENST00000381990 FAM220BPB1ANY3 271 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 FTH1P02794 183 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ALPIP09923 528 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 POLR2EP19388 210 aaKnown RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CTSOP43234 321 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 LSM3P62310 102 aaKnown RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 NTHL1P78549 312 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PRKCDQ05655 676 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 TRAF3Q13114 568 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 DMC1Q14565 340 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PON2Q15165 354 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 NR6A1Q15406 480 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF77Q15935 545 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 MAPKAPK3Q16644 382 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 C6orf183Q5T699 404 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 UBE2UQ5VVX9 321 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 TMEM236Q5W0B7 351 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PDE12Q6L8Q7 609 aaKnown RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PNCKQ6P2M8 343 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 C22orf39Q6P5X5 142 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 RNF165Q6ZSG1 346 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 GPSM1Q86YR5 675 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 MICU2Q8IYU8 434 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 STK40Q8N2I9 435 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CDYL2Q8N8U2 506 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 POC5Q8NA72 575 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF540Q8NDQ6 660 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 FRS2Q8WU20 508 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 GTF2H4Q92759 462 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PROX1Q92786 737 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 OR2B2Q9GZK3 357 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PCDH12Q9NPG4 1184 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 POLE4Q9NR33 117 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 SPHK2Q9NRA0 654 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ABCB10Q9NRK6 738 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 DPP7Q9UHL4 492 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 SLC25A13Q9UJS0 675 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 NOX1Q9Y5S8 564 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 A0A0U1RQS6 177 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 NEDD8-MDP1E9PL57 170 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CDC7O00311 574 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF197O14709 1029 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 DFNA5O60443 496 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 VPS26AO75436 327 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CREG1O75629 220 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 ARHGEF15O94989 841 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 OR4F21O95013 312 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 SNX4O95219 450 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 POU2F2P09086 479 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 CD36P16671 472 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 EFNA1P20827 205 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 TCEA1P23193 301 aaKnown RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 GKP32189 559 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 PTGER3P43115 390 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 STK19P49842 368 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-202ENST00000381990 AGTR2P50052 363 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 DEFA1P59665 94 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 DEFA3P59666 94 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 VAC14Q08AM6 782 aa8.68□□□□□ -1.02
GPNMB-202ENST00000381990 SLC13A2Q13183 592 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms