RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 LAPTM5Q13571 262 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 LIN52Q52LA3 116 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 SPIN4Q56A73 249 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 PAGE2BQ5JRK9 111 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 MED27Q6P2C8 311 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 SLCO4C1Q6ZQN7 724 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 CBR4Q8N4T8 237 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 LILRA3Q8N6C8 439 aaPredicted RBP22.36■■□□□ 1.17
VPS16-201ENST00000380443 OR8J2Q8NGG1 315 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 OR10A6Q8NH74 314 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 NUDT8Q8WV74 236 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 TFAP2CQ92754 450 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 NELL1Q92832 810 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 C11orf24Q96F05 449 aaPredicted RBP22.36■■□□□ 1.17
VPS16-201ENST00000380443 CD320Q9NPF0 282 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 FAM120CQ9NX05 1096 aaKnown RBP22.36■■□□□ 1.17
VPS16-201ENST00000380443 SIRT5Q9NXA8 310 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 PCDHB14Q9Y5E9 798 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 MTCH2Q9Y6C9 303 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 TCF20Q9UGU0 1960 aaKnown RBP22.36■■□□□ 1.17
VPS16-201ENST00000380443 LRRK1Q38SD2 2015 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 SMIM31A0A1B0GVY4 71 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 SAC3D1A6NKF1 404 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 PHC1P78364 1004 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 LRRC74AQ0VAA2 488 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 CCSMST1Q4G0I0 132 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 ZNF480Q8WV37 535 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 PIF1Q9H611 641 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 PNPLA3Q9NST1 481 aa22.36■■□□□ 1.17
VPS16-201ENST00000380443 MYO9BQ13459 2157 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 K7ESM1 405 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 FOXE1O00358 373 aaPredicted RBP22.35■■□□□ 1.17
VPS16-201ENST00000380443 KIF1CO43896 1103 aaKnown RBP22.35■■□□□ 1.17
VPS16-201ENST00000380443 APODP05090 189 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 PABPC4LP0CB38 370 aaKnown RBP22.35■■□□□ 1.17
VPS16-201ENST00000380443 TACR1P25103 407 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 TEAD1P28347 426 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 MYBPC1Q00872 1141 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 ENPP2Q13822 863 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 AGERQ15109 404 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 HIST2H2ACQ16777 129 aaPredicted RBP22.35■■□□□ 1.17
VPS16-201ENST00000380443 DUOXA1Q1HG43 343 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 PGS1Q32NB8 556 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 RNF220Q5VTB9 566 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 HIST2H2AA3Q6FI13 130 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 FAM120BQ96EK7 910 aaKnown RBP22.35■■□□□ 1.17
VPS16-201ENST00000380443 RNF145Q96MT1 663 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 MAGIXQ9H6Y5 334 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 OLAHQ9NV23 265 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 PPT2Q9UMR5 302 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 USP22Q9UPT9 525 aa22.35■■□□□ 1.17
VPS16-201ENST00000380443 CXCR6O00574 342 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 RFXANKO14593 260 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 ACOX3O15254 700 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 CLOCKO15516 846 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 TPST1O60507 370 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 PRSS23O95084 383 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 ZNF8P17098 575 aaPredicted RBP22.34■■□□□ 1.17
VPS16-201ENST00000380443 ACADLP28330 430 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 RPL5P46777 297 aaKnown RBP22.34■■□□□ 1.17
VPS16-201ENST00000380443 PLIN5Q00G26 463 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 CNTN1Q12860 1018 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 PIP5KL1Q5T9C9 394 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 TRMT11Q7Z4G4 463 aaKnown RBP22.34■■□□□ 1.17
VPS16-201ENST00000380443 EPHX4Q8IUS5 362 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 SYTL1Q8IYJ3 562 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 OR7G3Q8NG95 312 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 FAM110BQ8TC76 370 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 CHTF18Q8WVB6 975 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 UBE2E3Q969T4 207 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 REXO5Q96IC2 774 aaKnown RBP22.34■■□□□ 1.17
VPS16-201ENST00000380443 ADGRE2Q9UHX3 823 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 OAZ3Q9UMX2 235 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 TSC22D4Q9Y3Q8 395 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 ATG2AQ2TAZ0 1938 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 ARHGAP10A1A4S6 786 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 EVPLLA8MZ36 301 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 GPR89AB7ZAQ6 455 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 PI15O43692 258 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 ADH1BP00325 375 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 GPR89BP0CG08 455 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 PTPN6P29350 595 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 SLC44A4Q53GD3 710 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 KRT80Q6KB66 452 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 PNCKQ6P2M8 343 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 ZNF547Q8IVP9 402 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 LAS2Q8IYD9 372 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 ELSPBP1Q96BH3 223 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 CXorf40BQ96DE9 158 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 SEPHS2Q99611 448 aa22.34■■□□□ 1.17
VPS16-201ENST00000380443 PRPF18Q99633 342 aaKnown RBP22.34■■□□□ 1.17
VPS16-201ENST00000380443 KRT87PA6NCN2 255 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 CLPTM1O96005 669 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 SMIM18P0DKX4 95 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 C1GALT1C1LP0DN25 315 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 HSD17B2P37059 387 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 GZMMP51124 257 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 TBPL1P62380 186 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 GALNT18Q6P9A2 607 aa22.33■■□□□ 1.16
VPS16-201ENST00000380443 CAMKMTQ7Z624 323 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms