RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ANGPTL6Q8NI99 470 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 BPIFB1Q8TDL5 484 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 SELENOMQ8WWX9 145 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 FOXJ1Q92949 421 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 NEDD4LQ96PU5 975 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 PSKH2Q96QS6 385 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 ZNF300Q96RE9 604 aaPredicted RBP12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 NECTIN3Q9NQS3 549 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 FBXL12Q9NXK8 326 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 ARL15Q9NXU5 204 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 H3BUI4 141 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 TBL1XO60907 577 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 VPS4BO75351 444 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 GGT1P19440 569 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 NUDT6P53370 316 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 YBEYP58557 167 aaPredicted RBP12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 TYSND1Q2T9J0 566 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 FAM205BPQ63HN1 556 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 KIAA1841Q6NSI8 718 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 ZNF544Q6NX49 715 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 MRPL10Q7Z7H8 261 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 MICU2Q8IYU8 434 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 GTF2H4Q92759 462 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 TRIB3Q96RU7 358 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 MKRN2Q9H000 416 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 RERGLQ9H628 205 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 RETREG1Q9H6L5 497 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 LRTM1Q9HBL6 345 aa12.12□□□□□ -0.47
PRPF40B-202ENST00000380281 GLTPD2A6NH11 291 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 AGAP5A6NIR3 686 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 ZNF623O75123 536 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 CREG1O75629 220 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 PGLSO95336 258 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 PTGS2P35354 604 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 ANKS3Q6ZW76 656 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 CEP68Q76N32 757 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 HS6ST3Q8IZP7 471 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 EID3Q8N140 333 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 AUTS2Q8WXX7 1259 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 SNAPC3Q92966 411 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 TRIM63Q969Q1 353 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 MTERF1Q99551 399 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 ADGRE3Q9BY15 652 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 UGT2B28Q9BY64 529 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 DCSTAMPQ9H295 470 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 ABCG2Q9UNQ0 655 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 WBP11Q9Y2W2 641 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 ZNF236Q9UL36 1845 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 GREB1Q4ZG55 1949 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 LOC100506127A0A0U1RQW1 187 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 SNTNA6NMZ2 147 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 BCKDKO14874 412 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 POLR1CO15160 346 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 OPN1SWP03999 348 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 GBAP04062 536 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 HSMCR30P0CW71 290 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 POU2F1P14859 743 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 DCTP40126 519 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 GNPDA1P46926 289 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 CRHR2Q13324 411 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 BCL7AQ4VC05 210 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 SOWAHCQ53LP3 525 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 CACHD1Q5VU97 1274 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 TTC23Q5W5X9 447 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 ERAP2Q6P179 960 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 SBSNQ6UWP8 590 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 PTRH1Q86Y79 214 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 RIMKLAQ8IXN7 391 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 FAM109AQ8N4B1 249 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 SIMC1Q8NDZ2 872 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 WFDC5Q8TCV5 224 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 MBOAT4Q96T53 435 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 ZIM2Q9NZV7 527 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 KIF17Q9P2E2 1029 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 INTS6Q9UL03 887 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 POLHQ9Y253 713 aa12.11□□□□□ -0.47
PRPF40B-202ENST00000380281 WASH4PA8MWX3 477 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 B8ZZF3 427 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 TAPBPO15533 448 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 COCHO43405 550 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 RECQL5O94762 991 aaPredicted RBP12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 OTCP00480 354 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 LCKP06239 509 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 UMPSP11172 480 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 ATF6P18850 670 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 UQCRC1P31930 480 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 S100A3P33764 101 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 TRAF3Q13114 568 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 MBTPS1Q14703 1052 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 ZNF404Q494X3 552 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 ZDHHC21Q8IVQ6 265 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 STON2Q8WXE9 905 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 ASIC4Q96FT7 647 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 ZNF382Q96SR6 550 aa12.1□□□□□ -0.47
PRPF40B-202ENST00000380281 RANGRFQ9HD47 186 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms