RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SOD1P00441 154 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ELFN1P0C7U0 828 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 LINC00032P0C843 101 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 UROSP10746 265 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 CTPS1P17812 591 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 XPAP23025 273 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ACRV1P26436 265 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 NME5P56597 212 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 NFATC2Q13469 925 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 UBXN2BQ14CS0 331 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 PCBP2Q15366 365 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TSNQ15631 228 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ZNF284Q2VY69 593 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 RABL3Q5HYI8 236 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 PEAR1Q5VY43 1037 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 LAIR2Q6ISS4 152 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 PCYOX1LQ8NBM8 494 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TP53I13Q8NBR0 393 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 GPR26Q8NDV2 337 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 OR52E4Q8NGH9 312 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 FBLIM1Q8WUP2 373 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 FOXQ1Q9C009 403 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 FBXL12Q9NXK8 326 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 SERGEFQ9UGK8 458 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 BTRCQ9Y297 605 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 HEMK1Q9Y5R4 338 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 A0A0J9YVX5 310 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 NPEPPSL1A6NEC2 478 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TMEM221A6NGB7 291 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 M0R296 226 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ENO2P09104 434 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 C6P13671 934 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 HGFP14210 728 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 CALRP27797 417 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TRIM23P36406 574 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 POLR2IP36954 125 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 PTGER3P43115 390 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 GZMMP51124 257 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ERVPABLB-1P60509 514 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 UFM1P61960 85 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ERVK-8P63133 956 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 PRAMEP78395 509 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 SELPLGQ14242 412 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 LETMD1Q6P1Q0 360 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 LAYNQ6UX15 382 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 HORMAD1Q86X24 394 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 MSRB3Q8IXL7 192 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 SFRP1Q8N474 314 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TSTD1Q8NFU3 115 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 STAG3L4Q8TBR4 150 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ISOC1Q96CN7 298 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 NUS1Q96E22 293 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 SCARF2Q96GP6 870 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 C1QTNF7Q9BXJ2 289 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 TEX101Q9BY14 249 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ABCG8Q9H221 673 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 INTS7Q9NVH2 962 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 WSB2Q9NYS7 404 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 CIDEBQ9UHD4 219 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 ZFR2Q9UPR6 939 aaKnown RBP7.5□□□□□ -1.21
CDKL5-202ENST00000379996 PCDHB1Q9Y5F3 818 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 GMEB1Q9Y692 573 aa7.5□□□□□ -1.21
CDKL5-202ENST00000379996 A0A1W2PP55 124 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 TMX2-CTNND1H3BSU7 103 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 QSOX1O00391 747 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 OR1I1O60431 355 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 ACADMP11310 421 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 MTHFD1P11586 935 aaKnown RBP7.49□□□□□ -1.21
CDKL5-202ENST00000379996 MC4RP32245 332 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 CDH15P55291 814 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 TRAF3Q13114 568 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 MTAPQ13126 283 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 LDLRAP1Q5SW96 308 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 NANOGP8Q6NSW7 305 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 SLC36A4Q6YBV0 504 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 PRR23BQ6ZRT6 265 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 FAM47BQ8NA70 645 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 OR6P1Q8NGX9 317 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 KCNJ9Q92806 393 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 RMND5BQ96G75 393 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-202ENST00000379996 FAM83DQ9H4H8 585 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 NANOGQ9H9S0 305 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 OAZ3Q9UMX2 235 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 HS3ST3A1Q9Y663 406 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 IGHV1OR15-9A0A0B4J2B8 117 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 DYTNA2CJ06 578 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 FAM234BA2RU67 622 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 LRRC72A6NJI9 287 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 EIF3FO00303 357 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-202ENST00000379996 PIRTP0C851 137 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 UMPSP11172 480 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 JUNBP17275 347 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-202ENST00000379996 NELFEP18615 380 aaKnown RBP7.49□□□□□ -1.21
CDKL5-202ENST00000379996 ITGALP20701 1170 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 CD72P21854 359 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 JAK1P23458 1154 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 CD6P30203 668 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 NKG7Q16617 165 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 ZBED5Q49AG3 693 aa7.49□□□□□ -1.21
CDKL5-202ENST00000379996 BCL7AQ4VC05 210 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms