RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 IFNA7P01567 189 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 APOC2P02655 101 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SLC10A3P09131 477 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF865P0CJ78 1059 aaPredicted RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SMIM10L2AP0DMW4 78 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SMIM10L2BP0DMW5 78 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 UMPSP11172 480 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 APEHP13798 732 aaKnown RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 WARSP23381 471 aaKnown RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SLC6A2P23975 617 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ATP5C1P36542 298 aaKnown RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MAGEA12P43365 314 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 TM4SF4P48230 202 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CAPZA1P52907 286 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 RRAS2P62070 204 aaPredicted RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 IL5RAQ01344 420 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ROR1Q01973 937 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SCN1BQ07699 218 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 LGALS3BPQ08380 585 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 RPA4Q13156 261 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 RAPSNQ13702 412 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MFSD14CQ5VZR4 134 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 JADE1Q6IE81 842 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 GLCCI1Q86VQ1 547 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 IFNEQ86WN2 208 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 FUNDC1Q8IVP5 155 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 KBTBD8Q8NFY9 601 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 OR5T2Q8NGG2 359 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF431Q8TF32 576 aaPredicted RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 TOX2Q96NM4 488 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MCEEQ96PE7 176 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF251Q9BRH9 671 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SRRQ9GZT4 340 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ZNF768Q9H5H4 540 aaKnown RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 C17orf102A2RUQ5 167 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CARNS1A5YM72 827 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 FAM74A7A6NL05 159 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MYL12BO14950 172 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 UBDO15205 165 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ZBTB24O43167 697 aaPredicted RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CFDP00746 253 aaPredicted RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 EDN1P05305 212 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MYL12AP19105 171 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 TNFSF9P41273 254 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ADCYAP1R1P41586 468 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 GSTM5P46439 218 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PREPP48147 710 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CLCN4P51793 760 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 BCAT1P54687 386 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 FAM74A3Q4VXF1 159 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 LIPMQ5VYY2 423 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CCDC149Q6ZUS6 474 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CHMP1BQ7LBR1 199 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 SLC16A13Q7RTY0 426 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CLEC14AQ86T13 490 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 DMRTC2Q8IXT2 367 aaPredicted RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 CEP76Q8TAP6 659 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 KCTD13Q8WZ19 329 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 KIAA1191Q96A73 305 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PGAP3Q96FM1 320 aaPredicted RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PAPOLGQ9BWT3 736 aaKnown RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 DHX35Q9H5Z1 703 aaKnown RBP7.28□□□□□ -1.24
CDKL5-201ENST00000379989 NMRAL1Q9HBL8 299 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 MGAT4AQ9UM21 535 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 ABCG2Q9UNQ0 655 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 NDUFAF1Q9Y375 327 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 TPRKBQ9Y3C4 175 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 PCDHB14Q9Y5E9 798 aa7.28□□□□□ -1.24
CDKL5-201ENST00000379989 KRBOX1C9JBD0 128 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PIRO00625 290 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 RGS10O43665 173 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 EIF3GO75821 320 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 IPO13O94829 963 aaKnown RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 SBK3P0C264 359 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 CXCL8P10145 99 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 GPD1P21695 349 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 P2RY4P51582 365 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 LIMK1P53667 647 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ACY1Q03154 408 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PKDCCQ504Y2 493 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PABPC1L2AQ5JQF8 200 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 EEF1DP3Q658K8 133 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 RGMBQ6NW40 437 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 CYS1Q717R9 158 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ZC3HC1Q86WB0 502 aaKnown RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 XYLT1Q86Y38 959 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 RFX6Q8HWS3 928 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 TUBGCP3Q96CW5 907 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 RTP4Q96DX8 246 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 HOPXQ9BPY8 73 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ZNF670Q9BS34 389 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 C1QTNF1Q9BXJ1 281 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 GSX2Q9BZM3 304 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ACTR6Q9GZN1 396 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 OSGEPL1Q9H4B0 414 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ALG2Q9H553 416 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 ABCB8Q9NUT2 735 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 DNAJC11Q9NVH1 559 aa7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PIH1D1Q9NWS0 290 aaKnown RBP7.27□□□□□ -1.25
CDKL5-201ENST00000379989 PAK5Q9P286 719 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms