RNA–Protein interactions for RNA: ENST00000378593.6

AFF4-202, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-202ENST00000378593 DDX19BQ9UMR2 479 aa4.82□□□□□ -1.64
AFF4-202ENST00000378593 RPH3AQ9Y2J0 694 aaPredicted RBP4.82□□□□□ -1.64
AFF4-202ENST00000378593 TDRKHQ9Y2W6 561 aaKnown RBP4.82□□□□□ -1.64
AFF4-202ENST00000378593 TEX264Q9Y6I9 313 aa4.82□□□□□ -1.64
AFF4-202ENST00000378593 ARHGEF28Q8N1W1 1705 aaKnown RBP4.82□□□□□ -1.64
AFF4-202ENST00000378593 REREQ9P2R6 1566 aa4.82□□□□□ -1.64
AFF4-202ENST00000378593 AGLP35573 1532 aa4.82□□□□□ -1.64
AFF4-202ENST00000378593 ATP7BP35670 1465 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 CD163L1Q9NR16 1453 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 YTHDC2Q9H6S0 1430 aaKnown RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 KIF24Q5T7B8 1368 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 ILVBLA1L0T0 632 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 C5orf60A6NFR6 353 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 CASTOR2A6NHX0 329 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 ZNHIT1O43257 154 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 RNASEH1O60930 286 aaKnown RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 LDB3O75112 727 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 GLCEO94923 617 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 HAPLN1P10915 354 aaPredicted RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 HPDP32754 393 aaPredicted RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 NPBWR1P48145 328 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 ARCN1P48444 511 aaKnown RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 SERPINH1P50454 418 aaKnown RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 ZXDAP98168 799 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 TRAF2Q12933 501 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 IDI1Q13907 227 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 CA9Q16790 459 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 MTX3Q5HYI7 312 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 PXDC1Q5TGL8 231 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 PRAMEF8Q5VWM4 474 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 SUSD4Q5VX71 490 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 COLCA1Q6ZS62 124 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 MIER3Q7Z3K6 550 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 PRSS42Q7Z5A4 293 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 ARL6IP6Q8N6S5 226 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 RBMXL3Q8N7X1 1067 aaKnown RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 RASGEF1AQ8N9B8 481 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 NPEPL1Q8NDH3 523 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 FGFBP3Q8TAT2 258 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 FAM216AQ8WUB2 273 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 SLC20A1Q8WUM9 679 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 SLC13A3Q8WWT9 602 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 FIG4Q92562 907 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 PANX3Q96QZ0 392 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 OR1F2PQ96R84 312 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 RBM38Q9H0Z9 239 aaKnown RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 ABCG8Q9H221 673 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 HSD3B7Q9H2F3 369 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 Q9H8V8 135 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 POT1Q9NUX5 634 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 HIF1ANQ9NWT6 349 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 P4HTMQ9NXG6 502 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 SMARCAL1Q9NZC9 954 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 C11orf21Q9P2W6 132 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 MAD2L2Q9UI95 211 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 PIN4Q9Y237 131 aaKnown RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 WDR83OSQ9Y284 106 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 ITM2BQ9Y287 266 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 ATP6V0A2Q9Y487 856 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 INSL5Q9Y5Q6 135 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 TMEM131LA2VDJ0 1609 aa4.81□□□□□ -1.64
AFF4-202ENST00000378593 VIRMAQ69YN4 1812 aaKnown RBP4.81□□□□□ -1.64
AFF4-202ENST00000378593 ZNF804BA4D1E1 1349 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 C5orf51A6NDU8 294 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 TXNL1O43396 289 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 KCNJ13O60928 360 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 WDR1O75083 606 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 ATP9AO75110 1047 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 FRAT2O75474 233 aaPredicted RBP4.8□□□□□ -1.64
AFF4-202ENST00000378593 GLUD1P00367 558 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 TFAP2AP05549 437 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 IRF2P14316 349 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 GLUD2P49448 558 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 ISL1P61371 349 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 EEF1A1P68104 462 aaKnown RBP4.8□□□□□ -1.64
AFF4-202ENST00000378593 SRSF4Q08170 494 aaKnown RBP4.8□□□□□ -1.64
AFF4-202ENST00000378593 ILF2Q12905 390 aaKnown RBP4.8□□□□□ -1.64
AFF4-202ENST00000378593 TRAF3Q13114 568 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 GTF2H2Q13888 395 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 CALCRLQ16602 461 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 SRSF7Q16629 238 aaKnown RBP eCLIP4.8□□□□□ -1.64
AFF4-202ENST00000378593 UGT3A2Q3SY77 523 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 LRRC38Q5VT99 294 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 EEF1A1P5Q5VTE0 462 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 GTF2H2CQ6P1K8 395 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 PRSS55Q6UWB4 352 aaPredicted RBP4.8□□□□□ -1.64
AFF4-202ENST00000378593 BTNL8Q6UX41 500 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 PLXDC2Q6UX71 529 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 GFRALQ6UXV0 394 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 ASB18Q6ZVZ8 466 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 PIM3Q86V86 326 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 ANKRD46Q86W74 232 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 AMIGO1Q86WK6 493 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 LMNTD2Q8IXW0 634 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 KLHDC8AQ8IYD2 350 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 ZNF114Q8NC26 417 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 OR13J1Q8NGT2 312 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 CKAP2Q8WWK9 683 aa4.8□□□□□ -1.64
AFF4-202ENST00000378593 FRAT1Q92837 279 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms