RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CNTN5O94779 1100 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 RFC2P35250 354 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 GTDC1Q4AE62 458 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 OR7E24Q6IFN5 339 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 LINC01599Q8WXQ3 324 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 PABPC5Q96DU9 382 aaKnown RBP15.1■□□□□ 0.01
FXN-201ENST00000377270 HMCESQ96FZ2 354 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 FUBP3Q96I24 572 aaKnown RBP eCLIP15.1■□□□□ 0.01
FXN-201ENST00000377270 ELMO2Q96JJ3 720 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 TMEM68Q96MH6 324 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 KLHL5Q96PQ7 755 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 RACGAP1Q9H0H5 632 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 OSGEPL1Q9H4B0 414 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 POLE3Q9NRF9 147 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 TREX1Q9NSU2 369 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 EGFL7Q9UHF1 273 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 ERVK-19Q9WJR5 959 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 MTF2Q9Y483 593 aaPredicted RBP15.1■□□□□ 0.01
FXN-201ENST00000377270 PCDHB5Q9Y5E4 795 aa15.1■□□□□ 0.01
FXN-201ENST00000377270 NME4O00746 187 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 TLL1O43897 1013 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 SOAT2O75908 522 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 PEX11BO96011 259 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 GPIP06744 558 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 HAPLN1P10915 354 aaPredicted RBP15.09■□□□□ 0.01
FXN-201ENST00000377270 HK1P19367 917 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 POU1F1P28069 291 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 SHMT2P34897 504 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 RECQLP46063 649 aaPredicted RBP15.09■□□□□ 0.01
FXN-201ENST00000377270 CCT3P49368 545 aaKnown RBP15.09■□□□□ 0.01
FXN-201ENST00000377270 RENBPP51606 427 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 NCS1P62166 190 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 CREMQ03060 361 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 CTXN3Q4LDR2 81 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 MS4A13Q5J8X5 152 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 MSANTD2Q6P1R3 559 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 GPRIN3Q6ZVF9 776 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 MIB1Q86YT6 1006 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 UMODL1-AS1Q8N2C9 162 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 STYXQ8WUJ0 223 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 PAWRQ96IZ0 340 aaKnown RBP15.09■□□□□ 0.01
FXN-201ENST00000377270 ZYG11BQ9C0D3 744 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 SLC25A51Q9H1U9 297 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 ESRP2Q9H6T0 727 aaKnown RBP15.09■□□□□ 0.01
FXN-201ENST00000377270 BRD9Q9H8M2 597 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 LAMP5Q9UJQ1 280 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 FAM92AA1XBS5 289 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 FZD6O60353 706 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 WDPCPO95876 746 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 CHRM5P08912 532 aaPredicted RBP15.09■□□□□ 0.01
FXN-201ENST00000377270 TAS2R39P59534 338 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 SLC10A7Q0GE19 358 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 POU4F3Q15319 338 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 DPY19L1Q2PZI1 675 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 SETMARQ53H47 684 aaPredicted RBP15.09■□□□□ 0.01
FXN-201ENST00000377270 MARC1Q5VT66 337 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 KDELC1Q6UW63 502 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 SUSD1Q6UWL2 747 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 PARP16Q8N5Y8 322 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 RAD51AP1Q96B01 352 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 NPAS1Q99742 590 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 OMDQ99983 421 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 SPATA9Q9BWV2 254 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 SLC19A3Q9BZV2 496 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 ARNT2Q9HBZ2 717 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 TLR9Q9NR96 1032 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 GSN-AS1Q9NRJ2 163 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 XPR1Q9UBH6 696 aa15.09■□□□□ 0.01
FXN-201ENST00000377270 PNMA8BQ9ULN7 279 aaPredicted RBP15.09■□□□□ 0.01
FXN-201ENST00000377270 MYO16Q9Y6X6 1858 aa15.08■□□□□ 0.01
FXN-201ENST00000377270 TRBV23-1A0A0A0MS06 115 aa15.08■□□□□ 0
FXN-201ENST00000377270 TMEM189-UBE2V1I3L0A0 370 aa15.08■□□□□ 0
FXN-201ENST00000377270 HMBSP08397 361 aa15.08■□□□□ 0
FXN-201ENST00000377270 RHOQP17081 205 aa15.08■□□□□ 0
FXN-201ENST00000377270 CD86P42081 329 aa15.08■□□□□ 0
FXN-201ENST00000377270 CLCN4P51793 760 aa15.08■□□□□ 0
FXN-201ENST00000377270 RAB14P61106 215 aa15.08■□□□□ 0
FXN-201ENST00000377270 LGALS3BPQ08380 585 aa15.08■□□□□ 0
FXN-201ENST00000377270 ZNF169Q14929 603 aaPredicted RBP15.08■□□□□ 0
FXN-201ENST00000377270 PTPRRQ15256 657 aa15.08■□□□□ 0
FXN-201ENST00000377270 ZMAT1Q5H9K5 638 aa15.08■□□□□ 0
FXN-201ENST00000377270 LAMTOR1Q6IAA8 161 aa15.08■□□□□ 0
FXN-201ENST00000377270 KIAA0930Q6ICG6 404 aaPredicted RBP15.08■□□□□ 0
FXN-201ENST00000377270 ZNF683Q8IZ20 524 aa15.08■□□□□ 0
FXN-201ENST00000377270 C2CD4AQ8NCU7 369 aaPredicted RBP15.08■□□□□ 0
FXN-201ENST00000377270 TRIM43Q96BQ3 446 aaPredicted RBP15.08■□□□□ 0
FXN-201ENST00000377270 PRDM5Q9NQX1 630 aaPredicted RBP15.08■□□□□ 0
FXN-201ENST00000377270 ABCD2Q9UBJ2 740 aa15.08■□□□□ 0
FXN-201ENST00000377270 ZNF639Q9UID6 485 aa15.08■□□□□ 0
FXN-201ENST00000377270 DLX3O60479 287 aa15.08■□□□□ 0
FXN-201ENST00000377270 HSD17B1P14061 328 aa15.08■□□□□ 0
FXN-201ENST00000377270 ARSAP15289 507 aa15.08■□□□□ 0
FXN-201ENST00000377270 FAM189BP81408 668 aa15.08■□□□□ 0
FXN-201ENST00000377270 SIM2Q14190 667 aaPredicted RBP15.08■□□□□ 0
FXN-201ENST00000377270 CYP51A1Q16850 503 aa15.08■□□□□ 0
FXN-201ENST00000377270 LRRC26Q2I0M4 334 aa15.08■□□□□ 0
FXN-201ENST00000377270 FAM171A1Q5VUB5 890 aa15.08■□□□□ 0
FXN-201ENST00000377270 KIAA1614Q5VZ46 1190 aa15.08■□□□□ 0
FXN-201ENST00000377270 TFAP2EQ6VUC0 442 aa15.08■□□□□ 0
FXN-201ENST00000377270 THAP5Q7Z6K1 395 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms