RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 VEPH1Q14D04 833 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PTCHD3Q3KNS1 767 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PLEKHG6Q3KR16 790 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 FRG2Q64ET8 278 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 OR4F3Q6IEY1 312 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 EIF3MQ7L2H7 374 aaKnown RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 TSPYL5Q86VY4 417 aaPredicted RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 VRK3Q8IV63 474 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 TCEAL8Q8IYN2 117 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 SYNPOQ8N3V7 929 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ARL14EPQ8N8R7 260 aaPredicted RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 WDR20Q8TBZ3 569 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 MCOLN3Q8TDD5 553 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 PXYLP1Q8TE99 480 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 METTL2AQ96IZ6 378 aaKnown RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ZNF641Q96N77 438 aaPredicted RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 FRG2BQ96QU4 278 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 MROQ9BYG7 248 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 NMRK2Q9NPI5 230 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 KIAA1522Q9P206 1035 aaPredicted RBP10.36□□□□□ -0.75
ABCF1-202ENST00000376545 ERVK-18Q9QC07 812 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 CPQQ9Y646 472 aa10.36□□□□□ -0.75
ABCF1-202ENST00000376545 CLDN25C9JDP6 229 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 PTGES3LE9PB15 166 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 CLIC1O00299 241 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 SCAMP3O14828 347 aaKnown RBP10.35□□□□□ -0.75
ABCF1-202ENST00000376545 FTH1P02794 183 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 OR56A5P0C7T3 313 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 SRCP12931 536 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 FSHRP23945 695 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 KDELR2P33947 212 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 KIR3DL1P43629 444 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 MASP1P48740 699 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 AP1S2P56377 157 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 SP3Q02447 781 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 VEZF1Q14119 521 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 OXA1LQ15070 435 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 RGS21Q2M5E4 152 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 PGS1Q32NB8 556 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 ADPRMQ3LIE5 342 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 SLC44A4Q53GD3 710 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 LIPJQ5W064 366 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 P2RY13Q9BPV8 354 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 NEURL2Q9BR09 285 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 SPATA9Q9BWV2 254 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 EXD2Q9NVH0 621 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 SPATA6Q9NWH7 488 aaPredicted RBP10.35□□□□□ -0.75
ABCF1-202ENST00000376545 RPS6KA6Q9UK32 745 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 TPRKBQ9Y3C4 175 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 C1SP09871 688 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 EFNA1P20827 205 aaPredicted RBP10.35□□□□□ -0.75
ABCF1-202ENST00000376545 CD70P32970 193 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 PXNP49023 591 aaPredicted RBP10.35□□□□□ -0.75
ABCF1-202ENST00000376545 ITGA1P56199 1179 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 VLDLRP98155 873 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 IL5RAQ01344 420 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 KCNC3Q14003 757 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 NPTX1Q15818 432 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 TAF12Q16514 161 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 CAMKMTQ7Z624 323 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 OR10Q1Q8NGQ4 319 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 FAM120CQ9NX05 1096 aaKnown RBP10.35□□□□□ -0.75
ABCF1-202ENST00000376545 GIN1Q9NXP7 522 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 WARS2Q9UGM6 360 aaKnown RBP10.35□□□□□ -0.75
ABCF1-202ENST00000376545 MAFFQ9ULX9 164 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 HS3ST2Q9Y278 367 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 PMF1-BGLAPU3KQ54 211 aa10.35□□□□□ -0.75
ABCF1-202ENST00000376545 EVPLLA8MZ36 301 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 TMEM229AB2RXF0 380 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 SGTAO43765 313 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 FABP3P05413 133 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 ABCB1P08183 1280 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-202ENST00000376545 ENGP17813 658 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 CD22P20273 847 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 PSMD7P51665 324 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 CRYBA2P53672 197 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 MVKQ03426 396 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 MAD2L1BPQ15013 274 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-202ENST00000376545 MPPE1Q53F39 396 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 TXNDC8Q6A555 127 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 RFLNAQ6ZTI6 216 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 PRSS48Q7RTY5 328 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 CCDC71Q8IV32 467 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-202ENST00000376545 SLC22A15Q8IZD6 547 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 DYNC2LI1Q8TCX1 351 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 S100ZQ8WXG8 99 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 C7orf34Q96L11 122 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 ALPK1Q96QP1 1244 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 WDR12Q9GZL7 423 aaKnown RBP10.34□□□□□ -0.75
ABCF1-202ENST00000376545 REXO4Q9GZR2 422 aaKnown RBP10.34□□□□□ -0.75
ABCF1-202ENST00000376545 SUV39H2Q9H5I1 410 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 DNAJC11Q9NVH1 559 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 A8MX80 341 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 BOLA2-SMG1P6H3BVE0 249 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 FPGTO14772 594 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 YY2O15391 372 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 SERPINB7O75635 380 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 SPINT3P49223 89 aa10.34□□□□□ -0.75
ABCF1-202ENST00000376545 SNRPD1P62314 119 aaKnown RBP10.34□□□□□ -0.75
ABCF1-202ENST00000376545 SLC7A9P82251 487 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms