RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 C2orf80Q0P641 193 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CLCA4Q14CN2 919 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ELMSAN1Q6PJG2 1045 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 NCCRP1Q6ZVX7 275 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 NEK10Q6ZWH5 1172 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PHYKPLQ8IUZ5 450 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 COLGALT2Q8IYK4 626 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SVOPLQ8N434 492 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CYB5D2Q8WUJ1 264 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CNPPD1Q9BV87 410 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TAS2R16Q9NYV7 291 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ZNF840PA6NDX5 716 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 H0YAE9 185 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 FAM163BP0C2L3 166 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 LAMP1P11279 417 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CKMT1AP12532 417 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 FEN1P39748 380 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SNRPD1P62314 119 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 MORN1Q5T089 497 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RGMBQ6NW40 437 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 WFDC5Q8TCV5 224 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ACPTQ9BZG2 426 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SLC32A1Q9H598 525 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 GIN1Q9NXP7 522 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SYN3O14994 580 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CCNKO75909 580 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OAZ2O95190 189 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SNX4O95219 450 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ALDH1A1P00352 501 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SOX6P35712 828 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SH3YL1Q96HL8 342 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RNF167Q9H6Y7 350 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PAK1IP1Q9NWT1 392 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 GPR83Q9NYM4 423 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SARDHQ9UL12 918 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 BTBD3Q9Y2F9 522 aa13.97□□□□□ -0.17
TNFRSF1B-201ENST00000376259 A6NL46 340 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ERN1O75460 977 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ATF6P18850 670 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 AQP6Q13520 282 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CARD16Q5EG05 197 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 NOXRED1Q6NXP6 359 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CFAP206Q8IYR0 622 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OR13F1Q8NGS4 319 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 MTERF3Q96E29 417 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ART5Q96L15 291 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 OSBPL10Q9BXB5 764 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 TMEM121BQ9BXQ6 578 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 NTN4Q9HB63 628 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SNTG1Q9NSN8 517 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DOCK1Q14185 1865 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 DYTNA2CJ06 578 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CATP04040 527 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 ALPPL2P10696 532 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 PORP16435 677 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 KDELR2P33947 212 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 NSG1P42857 185 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 CTSOP43234 321 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RUNDC3AQ59EK9 446 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 FEVQ99581 238 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 RAD18Q9NS91 495 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 SLC25A13Q9UJS0 675 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 POU2F3Q9UKI9 436 aa13.96□□□□□ -0.17
TNFRSF1B-201ENST00000376259 IMPDH2P12268 514 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DCKP27707 260 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NR4A2P43354 598 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 VLDLRP98155 873 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 CREMQ03060 361 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SBSNQ6UWP8 590 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 Q6ZNX1 250 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MEX3DQ86XN8 651 aaKnown RBP13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 LGI4Q8N135 537 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GPR26Q8NDV2 337 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ZNF347Q96SE7 839 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 YIPF4Q9BSR8 244 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MRPL17Q9NRX2 175 aaKnown RBP13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SLC25A37Q9NYZ2 338 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ERGIC3Q9Y282 383 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GPC6Q9Y625 555 aaPredicted RBP13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GMEB1Q9Y692 573 aa13.96□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ERAL1O75616 437 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GALTP07902 379 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 HMGCLP35914 325 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 SFSWAPQ12872 951 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 AKAP14Q86UN6 197 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 IFNL1Q8IU54 200 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NXPE1Q8N323 547 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ZNF548Q8NEK5 533 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 OR10G2Q8NGC3 310 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 RAB8BQ92930 207 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ARMC5Q96C12 935 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 MCMBPQ9BTE3 642 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ERVK13-1Q9NX77 482 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 TMEM9Q9P0T7 183 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 C5AR2Q9P296 337 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 DYRK1BQ9Y463 629 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ZNF638Q14966 1978 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 NPIPB15A6NHN6 443 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 ETFAP13804 333 aa13.95□□□□□ -0.18
TNFRSF1B-201ENST00000376259 GSTM2P28161 218 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms