RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ITPKAP23677 461 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 CCT8P50990 548 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 TPTEP56180 551 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 CLPPQ16740 277 aaPredicted RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 HENMT1Q5T8I9 393 aaKnown RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 INTS11Q5TA45 600 aaKnown RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 PRAMEF9Q5VWM5 478 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 GLB1L3Q8NCI6 653 aaPredicted RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 ITFG1Q8TB96 612 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 MAGEE2Q8TD90 523 aaPredicted RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 ZNF583Q96ND8 569 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 ELOVL6Q9H5J4 265 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 CLMPQ9H6B4 373 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 FBXO10Q9UK96 956 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 SNX6Q9UNH7 406 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 AP2A2O94973 939 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 ARHGEF15O94989 841 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 IL6P05231 212 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 DGKGP49619 791 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 ABRQ12979 859 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 SP140Q13342 867 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 CAMK2BQ13554 666 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 SMUG1Q53HV7 270 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 XAF1Q6GPH4 301 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 TECPR1Q7Z6L1 1165 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 GALNT13Q8IUC8 556 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 DTWD1Q8N5C7 304 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 OR8J3Q8NGG0 315 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 ASZ1Q8WWH4 475 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 NSMCE2Q96MF7 247 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 CTRCQ99895 268 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 PSME2Q9UL46 239 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 DLGAP4Q9Y2H0 992 aa13.57□□□□□ -0.24
MSH5-202ENST00000375740 MRPS23Q9Y3D9 190 aaKnown RBP13.57□□□□□ -0.24
MSH5-202ENST00000375740 PLXNA2O75051 1894 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 SLC9A3R1O14745 358 aaPredicted RBP13.56□□□□□ -0.24
MSH5-202ENST00000375740 NOL3O60936 208 aaKnown RBP13.56□□□□□ -0.24
MSH5-202ENST00000375740 FTH1P02794 183 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 CYP17A1P05093 508 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 FCGR1AP12314 374 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 TCF3P15923 654 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 PCYT1AP49585 367 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 PIGFQ07326 219 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 ATP6AP1Q15904 470 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 TCEAL5Q5H9L2 206 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 DPPA4Q7L190 304 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 HOMEZQ8IX15 550 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 TBC1D21Q8IYX1 336 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 PACRGLQ8N7B6 248 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 RASGEF1AQ8N9B8 481 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 L3MBTL4Q8NA19 623 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 BTN2A2Q8WVV5 523 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 TIFAQ96CG3 184 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 OR52E6Q96RD3 313 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 ZSCAN5AQ9BUG6 496 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 C9orf16Q9BUW7 83 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 THUMPD3Q9BV44 507 aaKnown RBP13.56□□□□□ -0.24
MSH5-202ENST00000375740 DNAJC11Q9NVH1 559 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 MAGEL2Q9UJ55 1249 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 LINC01553A4QN01 128 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 SLCO2B1O94956 709 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
MSH5-202ENST00000375740 AP1S2P56377 157 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 PFN3P60673 137 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 RPS14P62263 151 aaKnown RBP13.56□□□□□ -0.24
MSH5-202ENST00000375740 IFITM2Q01629 132 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 GRIN2CQ14957 1233 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 ZNF284Q2VY69 593 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 ZIK1Q3SY52 487 aaPredicted RBP13.56□□□□□ -0.24
MSH5-202ENST00000375740 GGTA1PQ4G0N0 100 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 TBPL2Q6SJ96 375 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 NEK10Q6ZWH5 1172 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 C12orf40Q86WS4 652 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 MSRB3Q8IXL7 192 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 DHRSXQ8N5I4 330 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 ZNF707Q96C28 371 aaPredicted RBP13.56□□□□□ -0.24
MSH5-202ENST00000375740 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 ZNF347Q96SE7 839 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 CHID1Q9BWS9 393 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 SLC25A37Q9NYZ2 338 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 DKK3Q9UBP4 350 aa13.56□□□□□ -0.24
MSH5-202ENST00000375740 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.56□□□□□ -0.24
MSH5-202ENST00000375740 ZNF197O14709 1029 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 AREL1O15033 823 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 SEC14L2O76054 403 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 CPNE6O95741 557 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 SRPRAP08240 638 aaKnown RBP13.55□□□□□ -0.24
MSH5-202ENST00000375740 ADH5P11766 374 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 HLCSP50747 726 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 CTSCP53634 463 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 TMBIM6P55061 237 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 PHC1P78364 1004 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 ACOX1Q15067 660 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 GTF2IRD2BQ6EKJ0 949 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 LIPIQ6XZB0 460 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 SPRED1Q7Z699 444 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 RBM23Q86U06 439 aaKnown RBP13.55□□□□□ -0.24
MSH5-202ENST00000375740 GTF2IRD2Q86UP8 949 aa13.55□□□□□ -0.24
MSH5-202ENST00000375740 RASGRP3Q8IV61 690 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms