RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CERS6Q6ZMG9 384 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SCLYQ96I15 445 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF599Q96NL3 588 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 FLRT1Q9NZU1 646 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 CMAHPQ9Y471 501 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 OAS3Q9Y6K5 1087 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 PDPK1O15530 556 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 CDK4P11802 303 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 CKMT1AP12532 417 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 NCS1P62166 190 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SRSF11Q05519 484 aaKnown RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 MYBPC3Q14896 1274 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 NDUFA5Q16718 116 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 LILRA2Q8N149 483 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 POF1BQ8WVV4 589 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 UFD1Q92890 307 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 AP2M1Q96CW1 435 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SLC30A3Q99726 388 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 BOCQ9BWV1 1114 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 BEX2Q9BXY8 128 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 ITGB1BP2Q9UKP3 347 aa6.37□□□□□ -1.39
SMC1A-202ENST00000375340 SPIN1Q9Y657 262 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-202ENST00000375340 CHRNA1P02708 482 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ATP1B2P14415 290 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TNFRSF1BP20333 461 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ACRV1P26436 265 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 KCNAB2Q13303 367 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 KIAA1614Q5VZ46 1190 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZZZ3Q8IYH5 903 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SUSD6Q92537 303 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SLC9A6Q92581 669 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 KLK6Q92876 244 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MAL2Q969L2 176 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF382Q96SR6 550 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SPATA5L1Q9BVQ7 753 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TTTY10Q9BZA0 68 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SLC32A1Q9H598 525 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 VPS29Q9UBQ0 182 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF510Q9Y2H8 683 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 KLHL18O94889 574 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ALDOCP09972 364 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SLC35G4P0C7Q5 338 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MATN1P21941 496 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 GPX3P22352 226 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CXCR2P25025 360 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 PSMA1P25786 263 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CLCN4P51793 760 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZDHHC20Q5W0Z9 365 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 FAM20CQ8IXL6 584 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 OR10H4Q8NGA5 316 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF420Q8TAQ5 688 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TEFMQ96QE5 360 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MND1Q9BWT6 205 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 YTHDF1Q9BYJ9 559 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ANKRD60Q9BZ19 345 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 RNF38Q9H0F5 515 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 PAK1IP1Q9NWT1 392 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 GPR83Q9NYM4 423 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CNOT11Q9UKZ1 510 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 A0A1B0GW55 424 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TCRBV5S1A1TA0A578 114 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 GPR39O43194 453 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 DUX4L2P0CJ85 424 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 DUX4L3P0CJ86 424 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 DUX4L4P0CJ87 422 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 DUX4L5P0CJ88 424 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 DUX4L6P0CJ89 424 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 DUX4L7P0CJ90 424 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 PLA2G16P53816 162 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TRIM71Q2Q1W2 868 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 GTDC1Q4AE62 458 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 VTCN1Q7Z7D3 282 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ISCA2Q86U28 154 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZCCHC10Q8TBK6 192 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 PPP1R14BQ96C90 147 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CHIAQ9BZP6 476 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 MED28Q9H204 178 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 AGPAT4Q9NRZ5 378 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 DUX4Q9UBX2 424 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CHURC1-FNTBB4DL54 471 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 PTGESO14684 152 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 TPD52L2O43399 206 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CXCL14O95715 111 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 CTNNB1P35222 781 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 AP1S1P61966 158 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 RPS26P62854 115 aaKnown RBP6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZBTB6Q15916 424 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ASB18Q6ZVZ8 466 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 KDM1BQ8NB78 822 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF675Q8TD23 568 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF347Q96SE7 839 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 FAM83DQ9H4H8 585 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 AASDHPPTQ9NRN7 309 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 IL36AQ9UHA7 158 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 ISM1B1AKI9 464 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 H3BSH0 61 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 SLC1A7O00341 560 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 HNF1BP35680 557 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 OPRL1P41146 370 aa6.36□□□□□ -1.39
SMC1A-202ENST00000375340 GNA13Q14344 377 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms