RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 HS3ST4Q9Y661 456 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 KCNJ13O60928 360 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 VPS4BO75351 444 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 CCNYL3P0C7X3 344 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 IGFBP5P24593 272 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 MYL9P24844 172 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 MAXP61244 160 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 TXNDC8Q6A555 127 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 DENND6AQ8IWF6 608 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 YIPF7Q8N8F6 280 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 SPON2Q9BUD6 331 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 MMP28Q9H239 520 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 RIBC2Q9H4K1 309 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 MRPL17Q9NRX2 175 aaKnown RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 IL20Q9NYY1 176 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 RCOR3Q9P2K3 495 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 LIMD1Q9UGP4 676 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 GMPPBQ9Y5P6 360 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 ACTL7AQ9Y615 435 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 C1QBP02746 253 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 GGT1P19440 569 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 CTNNB1P35222 781 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 GRIK2Q13002 908 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 KEAP1Q14145 624 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 SIM2Q14190 667 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 TIGD6Q17RP2 521 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 METTL2BQ6P1Q9 378 aaKnown RBP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 AHSA2Q719I0 299 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 BNIPLQ7Z465 357 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 PHYKPLQ8IUZ5 450 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 MFSD6LQ8IWD5 586 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 FUBP3Q96I24 572 aaKnown RBP eCLIP11.82□□□□□ -0.52
C9orf3-203ENST00000375315 FRMD6Q96NE9 622 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 SLC22A12Q96S37 553 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 FAM83DQ9H4H8 585 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 ERVW-1Q9UQF0 538 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 INVSQ9Y283 1065 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 FRMPD3Q5JV73 1810 aa11.82□□□□□ -0.52
C9orf3-203ENST00000375315 LINC00862A6NCI5 91 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ASPDHA6ND91 283 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 AZIN1O14977 448 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SOD2P04179 222 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 IFNA16P05015 189 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ACADMP11310 421 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ZNF30P17039 623 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 CSTF2P33240 577 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■■□□ 15.5
C9orf3-203ENST00000375315 SNRPD2P62316 118 aaKnown RBP11.81□□□□□ -0.52
C9orf3-203ENST00000375315 CYP4F8P98187 520 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 IL1RL1Q01638 556 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 CDH17Q12864 832 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ZNF678Q5SXM1 525 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SPATA19Q7Z5L4 167 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SLC39A11Q8N1S5 342 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 VWA5B2Q8N398 1253 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ANKRD53Q8N9V6 530 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SPATA22Q8NHS9 363 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ZNF461Q8TAF7 563 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 WBP2Q969T9 261 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ITCHQ96J02 903 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 APOL5Q9BWW9 433 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 AASSQ9UDR5 926 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 TMEFF2Q9UIK5 374 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-203ENST00000375315 HSPB11Q9Y547 144 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 GPR45Q9Y5Y3 372 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 PTGDR2Q9Y5Y4 395 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 LINC00854A0A1B0GVQ3 168 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 HIDE1A8MVS5 230 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ZBTB24O43167 697 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-203ENST00000375315 CNPP09543 421 aaKnown RBP11.81□□□□□ -0.52
C9orf3-203ENST00000375315 EFNA1P20827 205 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SCNN1AP37088 669 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 PPP1R8Q12972 351 aaKnown RBP11.81□□□□□ -0.52
C9orf3-203ENST00000375315 ZNF267Q14586 743 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-203ENST00000375315 MFSD13AQ14CX5 517 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 GARNL3Q5VVW2 1013 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 FAM219BQ5XKK7 198 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 CAPN13Q6MZZ7 669 aaPredicted RBP11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SLC46A3Q7Z3Q1 461 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 GALNT5Q7Z7M9 940 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 CNTN4Q8IWV2 1026 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 L3HYPDHQ96EM0 354 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 Q96MT0 163 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 TMEM175Q9BSA9 504 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 RHNO1Q9BSD3 238 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SLAMF8Q9P0V8 285 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SCML2Q9UQR0 700 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 YIPF1Q9Y548 306 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 SHROOM3Q8TF72 1996 aa11.81□□□□□ -0.52
C9orf3-203ENST00000375315 E9PAM4 449 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 AKR7A2O43488 359 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 TRIM3O75382 744 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 SLC22A3O75751 556 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 RECQL5O94762 991 aaPredicted RBP11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ALPPP05187 535 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 FGF4P08620 206 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 ADORA3P0DMS8 318 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 PTPN3P26045 913 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 HLA-DMAP28067 261 aa11.8□□□□□ -0.52
C9orf3-203ENST00000375315 WEE1P30291 646 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms