RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RAVER1Q8IY67 606 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 C7orf61Q8IZ16 206 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TTC9BQ8N6N2 239 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ATL1Q8WXF7 558 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CCDC97Q96F63 343 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 YME1L1Q96TA2 773 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 COPS4Q9BT78 406 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 MARCH7Q9H992 704 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TRBV5-3A0A0A0MS03 114 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 METTL15A6NJ78 407 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 DYRK3O43781 588 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 PCDHGA12O60330 932 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 HOXD9P28356 352 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 DNAJA1P31689 397 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CASP3P42574 277 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 PPP3CCP48454 512 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 MAPKAPK2P49137 400 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 RPP38P78345 283 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 FADDQ13158 208 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CPSF6Q16630 551 aaKnown RBP eCLIP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.78□□□□□ -0.688e-6■■■■■ 27.9
CCDC40-203ENST00000374877 OTOP2Q7RTS6 562 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TSPYL5Q86VY4 417 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CALHM3Q86XJ0 350 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TMEM169Q96HH4 297 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 VN1R3Q9BXE9 311 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CIPCQ9C0C6 399 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 NEK6Q9HC98 313 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TM9SF3Q9HD45 589 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 NDRG4Q9ULP0 352 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 RNF6Q9Y252 685 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 RAI2Q9Y5P3 530 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 GBF1Q92538 1859 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ILVBLA1L0T0 632 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 LOC730098B7Z3J9 87 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 F5H5T6 163 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TAPBPO15533 448 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CCNKO75909 580 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 KRT75O95678 551 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 FABP3P05413 133 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TACR2P21452 398 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 FPR1P21462 350 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 HOXA9P31269 272 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 BMPR1AP36894 532 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 PTGER3P43115 390 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ARPP19P56211 112 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 RPS14P62263 151 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 VLDLRP98155 873 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 SLC14A1Q13336 389 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 SOWAHCQ53LP3 525 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 NADSYN1Q6IA69 706 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CCBE1Q6UXH8 406 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 TAS1R1Q7RTX1 841 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 CCDC71Q8IV32 467 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 AMER2Q8N7J2 671 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ATAD1Q8NBU5 361 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 SP7Q8TDD2 431 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 C17orf50Q8WW18 174 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 DNASE1L2Q92874 299 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 PSKH2Q96QS6 385 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 REXO4Q9GZR2 422 aaKnown RBP10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ANKHQ9HCJ1 492 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 IL1RAPQ9NPH3 570 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ERVW-1Q9UQF0 538 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 DLGAP4Q9Y2H0 992 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 DHRS7Q9Y394 339 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 PATJQ8NI35 1801 aa10.78□□□□□ -0.68
CCDC40-203ENST00000374877 ALPK3Q96L96 1907 aa10.77□□□□□ -0.68
CCDC40-203ENST00000374877 TAF4O00268 1085 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 RFXANKO14593 260 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 WBP4O75554 376 aaKnown RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 CCNDBP1O95273 360 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 C1QCP02747 245 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 KRT8P05787 483 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 CTSKP43235 329 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 MAGEA2P43356 314 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 CLCN4P51793 760 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 TUBA1BP68363 451 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 ABHD18Q0P651 414 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 TIGD6Q17RP2 521 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 Q6ZPB1 254 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 TUBA1AQ71U36 451 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 MMAAQ8IVH4 418 aaKnown RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 PSD4Q8NDX1 1056 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 IPCEF1Q8WWN9 437 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-203ENST00000374877 SPATA17Q96L03 361 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 KCNH6Q9H252 994 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 RNF167Q9H6Y7 350 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 REEP1Q9H902 201 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 AASDHPPTQ9NRN7 309 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 MAFFQ9ULX9 164 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 VPS4AQ9UN37 437 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 INSL6Q9Y581 213 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 VWA8A3KMH1 1905 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 PTPRDP23468 1912 aa10.77□□□□□ -0.69
CCDC40-203ENST00000374877 MTMR11A4FU01 709 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms