RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SF1Q15637 639 aaKnown RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 LRIF1Q5T3J3 769 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 ACSM2BQ68CK6 577 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 MED27Q6P2C8 311 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 SYT12Q8IV01 421 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 ANKFN1Q8N957 763 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 TP53I13Q8NBR0 393 aaPredicted RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 BIRC7Q96CA5 298 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 IL17FQ96PD4 163 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 INPP5KQ9BT40 448 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 THUMPD3Q9BV44 507 aaKnown RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 VCXQ9H320 206 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 FBXL12Q9NXK8 326 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 RAB26Q9ULW5 256 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 RUVBL1Q9Y265 456 aaKnown RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 PCDHB14Q9Y5E9 798 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 SZT2Q5T011 3432 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 A0A096LPI6 279 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 A6NHS1 94 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 DENRO43583 198 aaKnown RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 ERN1O75460 977 aaKnown RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 HOXB9P17482 250 aaPredicted RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 PRPS1L1P21108 318 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 NTSR1P30989 418 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 TRIM23P36406 574 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 LTBRP36941 435 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 ANKRD46Q86W74 232 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 TRPV3Q8NET8 790 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 DNAJB8Q8NHS0 232 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 METTL2AQ96IZ6 378 aaKnown RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 ITCHQ96J02 903 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 CIB1Q99828 191 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 SLC6A17Q9H1V8 727 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 WDR26Q9H7D7 661 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 CCDC177Q9NQR7 707 aaPredicted RBP18.92■□□□□ 0.62
HDAC1-201ENST00000373548 AGPAT4Q9NRZ5 378 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 DLGAP2Q9P1A6 1054 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 ANAPC2Q9UJX6 822 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 PLAGL1Q9UM63 463 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 AP4B1Q9Y6B7 739 aa18.92■□□□□ 0.62
HDAC1-201ENST00000373548 UNC80Q8N2C7 3258 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 PRR23AA6NEV1 266 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 TPST1O60507 370 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 SH3BGRLO75368 114 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 C1GALT1C1LP0DN25 315 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 UMPSP11172 480 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 GGT1P19440 569 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 TEAD1P28347 426 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 PTPN6P29350 595 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 RAE1P78406 368 aaKnown RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 MTAPQ13126 283 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 SLBPQ14493 270 aaKnown RBP eCLIP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 METRNLQ641Q3 311 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 ATG9BQ674R7 924 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 OR4F3Q6IEY1 312 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 OR10A6Q8NH74 314 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 GANCQ8TET4 914 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 TFGQ92734 400 aaPredicted RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 RAD51AP1Q96B01 352 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 NSMCE2Q96MF7 247 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 GABRG3Q99928 467 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 C1QTNF2Q9BXJ5 285 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 RMND5AQ9H871 391 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 GEMIN8Q9NWZ8 242 aaKnown RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 SCOCQ9UIL1 159 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 DNMT3AQ9Y6K1 912 aaPredicted RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 KANSL1LA0AUZ9 987 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 PRMT3O60678 531 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 CTHP32929 405 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 RPS13P62277 151 aaKnown RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 NRF1Q16656 503 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 UGT8Q16880 541 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 GPR180Q86V85 440 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 DCUN1D3Q8IWE4 304 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 C1orf52Q8N6N3 182 aaKnown RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 PAPD5Q8NDF8 572 aaKnown RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 ZNF548Q8NEK5 533 aaPredicted RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 OR2T12Q8NG77 320 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 SLC5A11Q8WWX8 675 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 FAM131CQ96AQ9 280 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 CCDC115Q96NT0 180 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 SLC29A1Q99808 456 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 SH3GL1Q99961 368 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 CPPED1Q9BRF8 314 aaPredicted RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 EFCAB11Q9BUY7 163 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 EHD1Q9H4M9 534 aa18.91■□□□□ 0.62
HDAC1-201ENST00000373548 TNRC18O15417 2968 aaPredicted RBP18.91■□□□□ 0.62
HDAC1-201ENST00000373548 XIRP2A4UGR9 3374 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 ANHXE9PGG2 379 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 ADAM23O75077 832 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 CKMT2P17540 419 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 KELP23276 732 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 CDKN2CP42773 168 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 KIR3DL1P43629 444 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 HSPA13P48723 471 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 RPS21P63220 83 aaKnown RBP18.9■□□□□ 0.62
HDAC1-201ENST00000373548 PRKCQQ04759 706 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 PDK3Q15120 406 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 MSANTD1Q6ZTZ1 278 aa18.9■□□□□ 0.62
HDAC1-201ENST00000373548 LAS2Q8IYD9 372 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms