RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 MTAPQ13126 283 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 DYNC1I2Q13409 638 aaKnown RBP18.14■□□□□ 0.49
USP49-202ENST00000373010 LPCAT2Q7L5N7 544 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 C12orf76Q8N812 135 aaPredicted RBP18.14■□□□□ 0.49
USP49-202ENST00000373010 ATL1Q8WXF7 558 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 LTB4R2Q9NPC1 389 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 SPATA6Q9NWH7 488 aaPredicted RBP18.14■□□□□ 0.49
USP49-202ENST00000373010 GULP1Q9UBP9 304 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 ERVK-11Q9UQG0 969 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 LINC01553A4QN01 128 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 H0YAE9 185 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 FPGTO14772 594 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 ASLP04424 464 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 ACPPP15309 386 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 WNT3P56703 355 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 ABHD18Q0P651 414 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 DUOXA1Q1HG43 343 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 GRHL2Q6ISB3 625 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 CES5AQ6NT32 575 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 TMEM179BQ7Z7N9 219 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 CELF5Q8N6W0 485 aaKnown RBP18.13■□□□□ 0.49
USP49-202ENST00000373010 ZNF784Q8NCA9 323 aaPredicted RBP18.13■□□□□ 0.49
USP49-202ENST00000373010 DTD2Q96FN9 168 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 REXO5Q96IC2 774 aaKnown RBP18.13■□□□□ 0.49
USP49-202ENST00000373010 COQ10AQ96MF6 247 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 SH3GL3Q99963 347 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 LIN28AQ9H9Z2 209 aaKnown RBP18.13■□□□□ 0.49
USP49-202ENST00000373010 THEGQ9P2T0 379 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 YY2O15391 372 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 SOD1P00441 154 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 COX7A2P14406 83 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 MYOGP15173 224 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 VAC14Q08AM6 782 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 SPESP1Q6UW49 350 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 CHST15Q7LFX5 561 aaPredicted RBP18.13■□□□□ 0.49
USP49-202ENST00000373010 SFTPA1Q8IWL2 248 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 CLECL1Q8IZS7 167 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 OR56A3Q8NH54 315 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 HCAR2Q8TDS4 363 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 ARRDC3Q96B67 414 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 ARMC5Q96C12 935 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 PANX1Q96RD7 426 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 TOR3AQ9H497 397 aa18.13■□□□□ 0.49
USP49-202ENST00000373010 MAGEB17A8MXT2 336 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 ZNF197O14709 1029 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 SCN2BO60939 215 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 CPSF4O95639 269 aaKnown RBP18.12■□□□□ 0.49
USP49-202ENST00000373010 ELK4P28324 431 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 ACSM2AQ08AH3 577 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 ACSM2BQ68CK6 577 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 NRSN1Q8IZ57 195 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 WFIKKN2Q8TEU8 576 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 SDCCAG3Q96C92 435 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 OR2AG1Q9H205 316 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 BTBD3Q9Y2F9 522 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 OTOL1A6NHN0 477 aaPredicted RBP18.12■□□□□ 0.49
USP49-202ENST00000373010 H0YIV9 168 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 H3BM21 787 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 ENGP17813 658 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 PRKACGP22612 351 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 CDK9P50750 372 aaKnown RBP18.12■□□□□ 0.49
USP49-202ENST00000373010 TSTA3Q13630 321 aaPredicted RBP18.12■□□□□ 0.49
USP49-202ENST00000373010 FNDC3BQ53EP0 1204 aaKnown RBP18.12■□□□□ 0.49
USP49-202ENST00000373010 FBXO46Q6PJ61 603 aaPredicted RBP18.12■□□□□ 0.49
USP49-202ENST00000373010 ZNF621Q6ZSS3 439 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 GPR141Q7Z602 305 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 CFAP206Q8IYR0 622 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 FOPNLQ96NB1 174 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 NPLQ9BXD5 320 aaPredicted RBP18.12■□□□□ 0.49
USP49-202ENST00000373010 RUVBL1Q9Y265 456 aaKnown RBP18.12■□□□□ 0.49
USP49-202ENST00000373010 CHD9Q3L8U1 2897 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 C5orf42Q9H799 3197 aa18.12■□□□□ 0.49
USP49-202ENST00000373010 CLIC1O00299 241 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 HOXC11O43248 304 aaPredicted RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 B4GAT1O43505 415 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 ADH1CP00326 375 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 LAMP1P11279 417 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 HNF4AP41235 474 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 RAE1P78406 368 aaKnown RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 SRSF11Q05519 484 aaKnown RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 ZCCHC8Q6NZY4 707 aaKnown RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 MSANTD1Q6ZTZ1 278 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 GALNT10Q86SR1 603 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 NLRP8Q86W28 1048 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 C1orf52Q8N6N3 182 aaKnown RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 ADAMTS16Q8TE57 1224 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 NEIL2Q969S2 332 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 SAMD11Q96NU1 681 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 OSBPL10Q9BXB5 764 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 EVPLLA8MZ36 301 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 TRMUO75648 421 aaKnown RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 RECQL5O94762 991 aaPredicted RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 HPRP00739 348 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 PRNPP04156 253 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 TRPC1P48995 793 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 VASPP50552 380 aaPredicted RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 SH3BGRP55822 239 aaPredicted RBP18.11■□□□□ 0.49
USP49-202ENST00000373010 PPP2R2BQ00005 443 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 SPIDRQ14159 915 aa18.11■□□□□ 0.49
USP49-202ENST00000373010 RBBP5Q15291 538 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms