RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 CLEC4AQ9UMR7 237 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 PLCH1Q4KWH8 1693 aa13.01□□□□□ -0.33
RAPGEF1-201ENST00000372189 FADS2P1A8MWK0 482 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 UPK3BL1B0FP48 263 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 UPK3BL2E5RIL1 263 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 M0QX08 132 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CLCQ05315 142 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CLEC6AQ6EIG7 209 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 USP43Q70EL4 1123 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CPNE9Q8IYJ1 553 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 TSSK3Q96PN8 268 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CHCHD6Q9BRQ6 235 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 GPR62Q9BZJ7 368 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 TPK1Q9H3S4 243 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZDHHC3Q9NYG2 299 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 STX16-NPEPL1H3BU86 382 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 STX16O14662 325 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CFHP08603 1231 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CDH5P33151 784 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 MYBPC1Q00872 1141 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CHIT1Q13231 466 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZBTB6Q15916 424 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CARTPTQ16568 116 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 KIAA0930Q6ICG6 404 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 OAFQ86UD1 273 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 P2RY13Q9BPV8 354 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 MATN4O95460 622 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 ARCN1P48444 511 aaKnown RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CAPZA1P52907 286 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 GDF10P55107 478 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 GRK1Q15835 563 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 RFTN2Q52LD8 501 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 PAOXQ6QHF9 649 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 ERMAPQ96PL5 475 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 GATA5Q9BWX5 397 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 TBC1D24Q9ULP9 559 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 J3KR12 359 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 MEN1O00255 615 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 RPLP0P05388 317 aaKnown RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 PCSK2P16519 638 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 ACADLP28330 430 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 BMPR1AP36894 532 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 HERC3Q15034 1050 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 IL23RQ5VWK5 629 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 FSTL4Q6MZW2 842 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 C22orf39Q6P5X5 142 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 AZIN2Q96A70 460 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 C11orf24Q96F05 449 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 CD320Q9NPF0 282 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 ACSS2Q9NR19 701 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 FBXW2Q9UKT8 454 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 MAN2B2Q9Y2E5 1009 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 TTC24A2A3L6 582 aaPredicted RBP13□□□□□ -0.33
RAPGEF1-201ENST00000372189 B3GALT2O43825 422 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 METTL18O95568 372 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 KLHDC10Q6PID8 442 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC22A18Q96BI1 424 aa13□□□□□ -0.33
RAPGEF1-201ENST00000372189 C5P01031 1676 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 FAM86C2PA6NEL3 165 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 COCHO43405 550 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ANXA4P09525 319 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 CREB1P16220 341 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 IL1R2P27930 398 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 GPR65Q8IYL9 337 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 EXOSC8Q96B26 276 aaKnown RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF350Q9GZX5 532 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 REV1Q9UBZ9 1251 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 TIMM22Q9Y584 194 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 GRXCR2A6NFK2 248 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 FAM25EA8MYX2 175 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF30P17039 623 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 PTX3P26022 381 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 CHRNA4P43681 627 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 SIRPB2Q5JXA9 342 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 TAS1R3Q7RTX0 852 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 WDSUB1Q8N9V3 476 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 FAM98AQ8NCA5 519 aaKnown RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 TRPV3Q8NET8 790 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 TRPS1Q9UHF7 1281 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 MCIDASD6RGH6 385 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 PI15O43692 258 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ZNF432O94892 652 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 NR4A1P22736 598 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 SLC7A1P30825 629 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 PRKD1Q15139 912 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 TMEM164Q5U3C3 297 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 LRRTM4Q86VH4 590 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 C12orf76Q8N812 135 aaPredicted RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 OR13C4Q8NGS5 318 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 TMEM209Q96SK2 561 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 BCL2L14Q9BZR8 327 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 UFSP2Q9NUQ7 469 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 TMEM248Q9NWD8 314 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 CNOT6Q9ULM6 557 aaKnown RBP12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 PHF24Q9UPV7 400 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 ADAMDEC1O15204 470 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 MMP20O60882 483 aa12.99□□□□□ -0.33
RAPGEF1-201ENST00000372189 KCNA5P22460 613 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms