RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 NCF1P14598 390 aaPredicted RBP12.06□□□□□ -0.48
SNCG-202ENST00000372017 LIFP15018 202 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 HIST1H2ADP20671 130 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 CRABP2P29373 138 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 RORAP35398 523 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 GDF5P43026 501 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 ITGA1P56199 1179 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 CDKL1Q00532 357 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 ZNF385CQ66K41 422 aaPredicted RBP12.06□□□□□ -0.48
SNCG-202ENST00000372017 ADGRD1Q6QNK2 874 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 RNF44Q7L0R7 432 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 TMEM126BQ8IUX1 230 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 TMEM151BQ8IW70 566 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 NLGN4XQ8N0W4 816 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 DTWD1Q8N5C7 304 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 NLGN4YQ8NFZ3 816 aaPredicted RBP12.06□□□□□ -0.48
SNCG-202ENST00000372017 AENQ8WTP8 325 aaKnown RBP12.06□□□□□ -0.48
SNCG-202ENST00000372017 MZB1Q8WU39 189 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 KIAA1191Q96A73 305 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 ESAMQ96AP7 390 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 RHBDF1Q96CC6 855 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 HIST1H2AHQ96KK5 128 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 ZNF285Q96NJ3 590 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 PRAP1Q96NZ9 151 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 ATOH8Q96SQ7 321 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 HIST1H2AJQ99878 128 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 PLCD4Q9BRC7 762 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 TMEM79Q9BSE2 394 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 H2AFJQ9BTM1 129 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 SPNS1Q9H2V7 528 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 ALG9Q9H6U8 611 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 PCMTD2Q9NV79 361 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 ZNF180Q9UJW8 692 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 PLCL2Q9UPR0 1127 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 ASB1Q9Y576 335 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 PCDHB3Q9Y5E6 796 aa12.06□□□□□ -0.48
SNCG-202ENST00000372017 MRPS18BQ9Y676 258 aaKnown RBP12.06□□□□□ -0.48
SNCG-202ENST00000372017 ZNF839A8K0R7 811 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 TRIM49D1C9J1S8 452 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 E7EQ34 232 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 HAT1O14929 419 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 LCMT2O60294 686 aaKnown RBP12.05□□□□□ -0.48
SNCG-202ENST00000372017 RFPL1O75677 317 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 OR2B3O76000 313 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 ZIC2O95409 532 aaPredicted RBP12.05□□□□□ -0.48
SNCG-202ENST00000372017 CAPN1P07384 714 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 LTA4HP09960 611 aaKnown RBP12.05□□□□□ -0.48
SNCG-202ENST00000372017 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 TFEBP19484 476 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 TYK2P29597 1187 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 SLC6A12P48065 614 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 GLRBP48167 497 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 SERPINB9P50453 376 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 ATP6V0D1P61421 351 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 CSNK1G2P78368 415 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 MAP7Q14244 749 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 PTCHD3Q3KNS1 767 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 CATSPEREQ5SY80 951 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 THEMIS2Q5TEJ8 643 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 WDR93Q6P2C0 686 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 LCTLQ6UWM7 567 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 C6orf15Q6UXA7 325 aaPredicted RBP12.05□□□□□ -0.48
SNCG-202ENST00000372017 ZNF517Q6ZMY9 492 aaPredicted RBP12.05□□□□□ -0.48
SNCG-202ENST00000372017 LRRC69Q6ZNQ3 347 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 ADAMTSL2Q86TH1 951 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 KLHDC8AQ8IYD2 350 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 DSELQ8IZU8 1212 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 OR8K5Q8NH50 307 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 UBLCP1Q8WVY7 318 aaPredicted RBP12.05□□□□□ -0.48
SNCG-202ENST00000372017 BBC3Q96PG8 261 aaPredicted RBP12.05□□□□□ -0.48
SNCG-202ENST00000372017 OR2A5Q96R48 311 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 PARD6BQ9BYG5 372 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 TRIM54Q9BYV2 358 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 PRORYQ9H606 182 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 LHX9Q9NQ69 397 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 ENAMQ9NRM1 1142 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 IL17BQ9UHF5 180 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 SERTAD3Q9UJW9 196 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 SLC22A14Q9Y267 594 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 ACOT9Q9Y305 439 aa12.05□□□□□ -0.48
SNCG-202ENST00000372017 CCDC88CQ9P219 2028 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 A0A087X1B8 175 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 FEZF1A0PJY2 475 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 UBXN8O00124 270 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 P2RX6O15547 441 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 PRAMEF4O60810 478 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 CPNE3O75131 537 aaKnown RBP12.04□□□□□ -0.48
SNCG-202ENST00000372017 STATHP02808 62 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 ANXA5P08758 320 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 CDH1P12830 882 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 MTHFD2P13995 350 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 ITGAXP20702 1163 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 HSD17B3P37058 310 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 SLC26A3P40879 764 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 STAT5AP42229 794 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 SERPINB8P50452 374 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 VSX2P58304 361 aaPredicted RBP12.04□□□□□ -0.48
SNCG-202ENST00000372017 ABATP80404 500 aa12.04□□□□□ -0.48
SNCG-202ENST00000372017 ABHD18Q0P651 414 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms