RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 NMBRP28336 390 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 POLE2P56282 527 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 STX1BP61266 288 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 HHEXQ03014 270 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ZFP36L1Q07352 338 aaKnown RBP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 VAC14Q08AM6 782 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 TRA2AQ13595 282 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 TRIM25Q14258 630 aaKnown RBP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 GRAMD1BQ3KR37 738 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 PHF19Q5T6S3 580 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 FAM45BPQ6NSW5 357 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 CES3Q6UWW8 571 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 CHSY3Q70JA7 882 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 MAVSQ7Z434 540 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF605Q86T29 641 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 SLC9B2Q86UD5 537 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 LRRTM4Q86VH4 590 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 SNX32Q86XE0 403 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 POU5F2Q8N7G0 328 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 SPDYE1Q8NFV5 336 aaPredicted RBP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 FAM45AQ8TCE6 357 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 BLOC1S5Q8TDH9 187 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 SLC37A2Q8TED4 501 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 PYDC1Q8WXC3 89 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 LZICQ8WZA0 190 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 TTC9Q92623 222 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ZUFSPQ96AP4 578 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 EID2BQ96D98 161 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ASB9Q96DX5 294 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 AHCYL2Q96HN2 611 aaKnown RBP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ELMO2Q96JJ3 720 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ZNF385DQ9H6B1 395 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 WDR41Q9HAD4 459 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 SYTL2Q9HCH5 934 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 GID8Q9NWU2 228 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ATXN10Q9UBB4 475 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 ATXN7L1Q9ULK2 861 aaPredicted RBP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 VPS9D1Q9Y2B5 631 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 NDUFAF1Q9Y375 327 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 LOXL2Q9Y4K0 774 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 PCDHGA7Q9Y5G6 932 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 SPO11Q9Y5K1 396 aa10.09□□□□□ -0.79
COL5A1-202ENST00000371820 OAS3Q9Y6K5 1087 aaKnown RBP10.09□□□□□ -0.79
COL5A1-202ENST00000371820 GLYATL1P3A0A0U1RQE8 302 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 UBDO15205 165 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 STX7O15400 261 aaKnown RBP10.08□□□□□ -0.8
COL5A1-202ENST00000371820 B4GAT1O43505 415 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 ZBTB14O43829 449 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 DLX3O60479 287 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SKAP2O75563 359 aaPredicted RBP10.08□□□□□ -0.8
COL5A1-202ENST00000371820 IPO13O94829 963 aaKnown RBP10.08□□□□□ -0.8
COL5A1-202ENST00000371820 CDK14O94921 469 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 VAPBO95292 243 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SNRPB2P08579 225 aaKnown RBP10.08□□□□□ -0.8
COL5A1-202ENST00000371820 FGF4P08620 206 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SLC35E2BP0CK96 405 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 F3P13726 295 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 ZNF8P17098 575 aaPredicted RBP10.08□□□□□ -0.8
COL5A1-202ENST00000371820 ADRA1AP35348 466 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 UGT1A5P35504 534 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 PEX19P40855 299 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 ARCN1P48444 511 aaKnown RBP10.08□□□□□ -0.8
COL5A1-202ENST00000371820 EPHA4P54764 986 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 OR1D5P58170 312 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SQSTM1Q13501 440 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 C11orf91Q3C1V1 193 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 AMZ1Q400G9 498 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 COQ5Q5HYK3 327 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SAMD4BQ5PRF9 694 aaKnown RBP10.08□□□□□ -0.8
COL5A1-202ENST00000371820 LDLRAP1Q5SW96 308 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 TMEM164Q5U3C3 297 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 BORAQ6PGQ7 559 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 FKBP9P1Q75LS8 142 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 B3GNT8Q7Z7M8 397 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 HPS6Q86YV9 775 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SLITRK4Q8IW52 837 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 CLYBLQ8N0X4 340 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SFRP1Q8N474 314 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 TMEM151AQ8N4L1 468 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 TTC30BQ8N4P2 665 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 PACRGLQ8N7B6 248 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 OR4D9Q8NGE8 314 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 FBXO27Q8NI29 283 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 PATE1Q8WXA2 126 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 C19orf43Q9BQ61 176 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 TIMM29Q9BSF4 260 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 FICDQ9BVA6 458 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 OSBPL11Q9BXB4 747 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 B3GNT4Q9C0J1 378 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 OR2AG1Q9H205 316 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 OSGEPL1Q9H4B0 414 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 MEAF6Q9HAF1 191 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 BPIFA1Q9NP55 256 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 SARS2Q9NP81 518 aaKnown RBP10.08□□□□□ -0.8
COL5A1-202ENST00000371820 TREX1Q9NSU2 369 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 IL17CQ9P0M4 197 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 ZDHHC2Q9UIJ5 367 aa10.08□□□□□ -0.8
COL5A1-202ENST00000371820 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms