RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 SLC29A3Q9BZD2 475 aa16.04■□□□□ 0.16
SCP2-201ENST00000371509 S100A14Q9HCY8 104 aa16.04■□□□□ 0.16
SCP2-201ENST00000371509 PRDM8Q9NQV8 689 aa16.04■□□□□ 0.16
SCP2-201ENST00000371509 TRNAU1APQ9NX07 287 aaKnown RBP16.04■□□□□ 0.16
SCP2-201ENST00000371509 TBC1D29Q9UFV1 150 aa16.04■□□□□ 0.16
SCP2-201ENST00000371509 CFAP20Q9Y6A4 193 aaKnown RBP16.04■□□□□ 0.16
SCP2-201ENST00000371509 H3BM21 787 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 LSM1O15116 133 aaKnown RBP16.03■□□□□ 0.16
SCP2-201ENST00000371509 CFLARO15519 480 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 PSIP1O75475 530 aaKnown RBP16.03■□□□□ 0.16
SCP2-201ENST00000371509 EPN2O95208 641 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 ANPEPP15144 967 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 XRCC1P18887 633 aaPredicted RBP16.03■□□□□ 0.16
SCP2-201ENST00000371509 CLCNKAP51800 687 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 NME5P56597 212 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 DMPKQ09013 629 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 RCAN2Q14206 197 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 ABRAXAS2Q15018 415 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 ATP6AP1LQ52LC2 224 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 SLC22A15Q8IZD6 547 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 OR52A5Q9H2C5 316 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 PACSIN3Q9UKS6 424 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 NDUFAF1Q9Y375 327 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 PABPN1LA6NDY0 278 aaKnown RBP16.03■□□□□ 0.16
SCP2-201ENST00000371509 PRR19A6NJB7 356 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 HIST1H2AGP0C0S8 130 aaPredicted RBP16.03■□□□□ 0.16
SCP2-201ENST00000371509 HIST1H2ADP20671 130 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 ME2P23368 584 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 HOXD12P35452 270 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 VHLP40337 213 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 ERFP50548 548 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 SESN3P58005 492 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 EMX2Q04743 252 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 ILF3Q12906 894 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCP2-201ENST00000371509 RPS6KA2Q15349 733 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 GGTA1PQ4G0N0 100 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 TCEAL6Q6IPX3 200 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 LRRC74BQ6ZQY2 392 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 TAF8Q7Z7C8 310 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 GPBAR1Q8TDU6 330 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 LMX1AQ8TE12 382 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 TCEAL3Q969E4 200 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 FBXL8Q96CD0 374 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 HIST1H2AHQ96KK5 128 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 HIST1H2AJQ99878 128 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 H2AFJQ9BTM1 129 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 CAPN10Q9HC96 672 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 ZIM2Q9NZV7 527 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 RNF11Q9Y3C5 154 aa16.03■□□□□ 0.16
SCP2-201ENST00000371509 PCM1Q15154 2024 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 PDZK1P1A8MUH7 402 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 ARHGEF33A8MVX0 844 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 E7ENX8 843 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 TRIM38O00635 465 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 TRIM46Q7Z4K8 759 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 SFTPA2Q8IWL1 248 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 PCYOX1LQ8NBM8 494 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 OR2I1PQ8NGU4 316 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 CEP76Q8TAP6 659 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 MCOLN3Q8TDD5 553 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 ATOH1Q92858 354 aaPredicted RBP16.02■□□□□ 0.16
SCP2-201ENST00000371509 USP7Q93009 1102 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 RSRC1Q96IZ7 334 aaKnown RBP16.02■□□□□ 0.16
SCP2-201ENST00000371509 LOXL4Q96JB6 756 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 ELF4Q99607 663 aaPredicted RBP16.02■□□□□ 0.16
SCP2-201ENST00000371509 PRRX2Q99811 253 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 GPATCH1Q9BRR8 931 aaKnown RBP16.02■□□□□ 0.16
SCP2-201ENST00000371509 C1orf50Q9BV19 199 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 IL21RQ9HBE5 538 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 SPAG4Q9NPE6 437 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 UCKL1Q9NWZ5 548 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 SCHIP1Q9P0W5 487 aaPredicted RBP16.02■□□□□ 0.16
SCP2-201ENST00000371509 MAP10Q9P2G4 905 aa16.02■□□□□ 0.16
SCP2-201ENST00000371509 SUCOQ9UBS9 1254 aaKnown RBP16.02■□□□□ 0.16
SCP2-201ENST00000371509 CUL9Q8IWT3 2517 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 PCDH15Q96QU1 1955 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 TRBV23OR9-2A0A075B6M9 112 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 KCNE1BA0A087WTH5 132 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 KRT87PA6NCN2 255 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 FXYD1O00168 92 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 MANBAO00462 879 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 IDSP22304 550 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 MAPK9P45984 424 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 HNRNPKP61978 463 aaKnown RBP eCLIP16.01■□□□□ 0.15
SCP2-201ENST00000371509 BNIP3Q12983 259 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 CLCA4Q14CN2 919 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 NR6A1Q15406 480 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 SHBQ15464 509 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 SMU1Q2TAY7 513 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 HLA-BQ31612 363 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 PTCHD3Q3KNS1 767 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.01■□□□□ 0.15
SCP2-201ENST00000371509 DUS1LQ6P1R4 473 aaKnown RBP16.01■□□□□ 0.15
SCP2-201ENST00000371509 SLC23A3Q6PIS1 610 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 KLHDC8AQ8IYD2 350 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 FNDC5Q8NAU1 212 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 SUMF1Q8NBK3 374 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 ZNF548Q8NEK5 533 aaPredicted RBP16.01■□□□□ 0.15
SCP2-201ENST00000371509 PYDC1Q8WXC3 89 aa16.01■□□□□ 0.15
SCP2-201ENST00000371509 SLC45A3Q96JT2 553 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms