RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CACTIN-AS1Q8N1I8 211 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 TEX9Q8N6V9 391 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 GOLGA6L1Q8N7Z2 621 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 WDR36Q8NI36 951 aaKnown RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 NEIL2Q969S2 332 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 GRAMD1AQ96CP6 724 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 SLC41A2Q96JW4 573 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 OR6C1Q96RD1 312 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 CTRCQ99895 268 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 VIPAS39Q9H9C1 493 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 ZNF446Q9NWS9 450 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 SEMA5BQ9P283 1151 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 TMCO1Q9UM00 188 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 PLLPQ9Y342 182 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 KCNE2Q9Y6J6 123 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 MDC1Q14676 2089 aaKnown RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 A0A0J9YVX5 310 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 K7EPI3 171 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 PLD2O14939 933 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 HCRTR1O43613 425 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 FKBP9O95302 570 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 ADRB1P08588 477 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 CPA3P15088 417 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 ATP5F1P24539 256 aaPredicted RBP13.35□□□□□ -0.27
TPM3-211ENST00000368531 GABREP78334 506 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 ABATP80404 500 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 CDC16Q13042 620 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 PDK4Q16654 411 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 ZYG11AQ6WRX3 759 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 RPS27LQ71UM5 84 aaKnown RBP13.35□□□□□ -0.27
TPM3-211ENST00000368531 PLD3Q8IV08 490 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 CARFQ8N187 725 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 D2HGDHQ8N465 521 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 UBTD2Q8WUN7 234 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 SLC5A11Q8WWX8 675 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 N4BP2L2Q92802 583 aaPredicted RBP13.35□□□□□ -0.27
TPM3-211ENST00000368531 ZUFSPQ96AP4 578 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 MOCOSQ96EN8 888 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 TCTN2Q96GX1 697 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 FCRL4Q96PJ5 515 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 APMAPQ9HDC9 416 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 IRAK4Q9NWZ3 460 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 MKS1Q9NXB0 559 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 SLC39A1Q9NY26 324 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 SNX7Q9UNH6 387 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 BTRCQ9Y297 605 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 PIEZO1Q92508 2521 aa13.35□□□□□ -0.27
TPM3-211ENST00000368531 MED19A0JLT2 244 aaPredicted RBP13.34□□□□□ -0.27
TPM3-211ENST00000368531 FEZF1A0PJY2 475 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 TRABD2BA6NFA1 517 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 E7EQ34 232 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 G3V2L1 256 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 STX16-NPEPL1H3BU86 382 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 STX16O14662 325 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 CLGNO14967 610 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 TYROBPO43914 113 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 CTSVO60911 334 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 TNFSF15O95150 251 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 TSPAN8P19075 237 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 VARSP26640 1264 aaKnown RBP13.34□□□□□ -0.27
TPM3-211ENST00000368531 ARL1P40616 181 aaPredicted RBP13.34□□□□□ -0.27
TPM3-211ENST00000368531 CCR8P51685 355 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 CYP4F3Q08477 520 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 TUBB3Q13509 450 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 PCBP2Q15366 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
TPM3-211ENST00000368531 AGBL2Q5U5Z8 902 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 ZNF425Q6IV72 752 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 LRRC70Q7Z2Q7 622 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 GOLGA7Q7Z5G4 137 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 PAQR7Q86WK9 346 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 KLHDC8AQ8IYD2 350 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 ANKRD42Q8N9B4 389 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 PPP4R1Q8TF05 950 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 TLCD1Q96CP7 247 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 NSUN5Q96P11 429 aaKnown RBP13.34□□□□□ -0.27
TPM3-211ENST00000368531 PLCD4Q9BRC7 762 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 FGF21Q9NSA1 209 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 TMEM184CQ9NVA4 438 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 WASF3Q9UPY6 502 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 TNPO3Q9Y5L0 923 aaKnown RBP13.34□□□□□ -0.27
TPM3-211ENST00000368531 AK5Q9Y6K8 562 aa13.34□□□□□ -0.27
TPM3-211ENST00000368531 WDR91A4D1P6 747 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 OR2A25A4D2G3 310 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 TMEM150CB9EJG8 249 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 HAT1O14929 419 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 H2AFYO75367 372 aaKnown RBP13.33□□□□□ -0.28
TPM3-211ENST00000368531 SUPT7LO94864 414 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 STATHP02808 62 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 EIF2S1P05198 315 aaKnown RBP13.33□□□□□ -0.28
TPM3-211ENST00000368531 EPB42P16452 691 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 GNAZP19086 355 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 PRKAA2P54646 552 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 CDH13P55290 713 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 CSNK1G2P78368 415 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 MC2RQ01718 297 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 ACY1Q03154 408 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 EIF3IQ13347 325 aaKnown RBP13.33□□□□□ -0.28
TPM3-211ENST00000368531 GTF2H2Q13888 395 aa13.33□□□□□ -0.28
TPM3-211ENST00000368531 NAA25Q14CX7 972 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms