RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 C9orf64Q5T6V5 341 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 ACSM2BQ68CK6 577 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 CAPN13Q6MZZ7 669 aaPredicted RBP13.58□□□□□ -0.24
USF1-202ENST00000368020 PARM1Q6UWI2 310 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 C12orf40Q86WS4 652 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 SYT12Q8IV01 421 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 EID3Q8N140 333 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 SVOPLQ8N434 492 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 TSPAN14Q8NG11 270 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 OR8J2Q8NGG1 315 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 OR10A6Q8NH74 314 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 FGF14Q92915 247 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 CXorf40BQ96DE9 158 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 FAM120BQ96EK7 910 aaKnown RBP13.58□□□□□ -0.24
USF1-202ENST00000368020 REXO5Q96IC2 774 aaKnown RBP13.58□□□□□ -0.24
USF1-202ENST00000368020 SEPHS2Q99611 448 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 SPATA9Q9BWV2 254 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 YTHDF1Q9BYJ9 559 aaKnown RBP13.58□□□□□ -0.24
USF1-202ENST00000368020 PAIP1Q9H074 479 aaKnown RBP13.58□□□□□ -0.24
USF1-202ENST00000368020 EHD1Q9H4M9 534 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 TRIM39Q9HCM9 518 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 CORO2BQ9UQ03 480 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 AP1M2Q9Y6Q5 423 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 TCF20Q9UGU0 1960 aaKnown RBP13.58□□□□□ -0.24
USF1-202ENST00000368020 C5orf42Q9H799 3197 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 H3BNH8 94 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 CXCR6O00574 342 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 RFXANKO14593 260 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 ACOX3O15254 700 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 ZNF23P17027 643 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 GPR1P46091 355 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 NAE1Q13564 534 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 DOC2AQ14183 400 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 SELPLGQ14242 412 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 MYBPC3Q14896 1274 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 DUOXA1Q1HG43 343 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 SLC36A3Q495N2 470 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 FAM46CQ5VWP2 391 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 ERICH5Q6P6B1 374 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 IYDQ6PHW0 289 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 NUDT18Q6ZVK8 323 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 CALHM3Q86XJ0 350 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 DHRSXQ8N5I4 330 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 VPS37AQ8NEZ2 397 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 ZFAND2BQ8WV99 257 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 NCSTNQ92542 709 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 FIG4Q92562 907 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 FAM162AQ96A26 154 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 MED8Q96G25 268 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 VPS50Q96JG6 964 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 APOLD1Q96LR9 279 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 CPPED1Q9BRF8 314 aaPredicted RBP13.57□□□□□ -0.24
USF1-202ENST00000368020 WRAP53Q9BUR4 548 aaKnown RBP13.57□□□□□ -0.24
USF1-202ENST00000368020 EFCAB11Q9BUY7 163 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 HDAC8Q9BY41 377 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 MYO10Q9HD67 2058 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 VCX3AQ9NNX9 186 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 SERHLQ9NQF3 203 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 SLC25A37Q9NYZ2 338 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 DNAJB9Q9UBS3 223 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 ADGRE2Q9UHX3 823 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 DMTF1Q9Y222 760 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 PCDHB14Q9Y5E9 798 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 F5P12259 2224 aa13.57□□□□□ -0.24
USF1-202ENST00000368020 FAM149AA5PLN7 773 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 KLHL33A6NCF5 533 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 LZTS3O60299 673 aaPredicted RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 C1orf105O95561 183 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 SLC16A8O95907 504 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 C6P13671 934 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PPIBP23284 216 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 IMPA1P29218 277 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 CAPGP40121 348 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 EIF2DP41214 584 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 NEK2P51955 445 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PHEXP78562 749 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 RPA4Q13156 261 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 BIRC2Q13490 618 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 LAPTM5Q13571 262 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PGS1Q32NB8 556 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 ZNF658BQ4V348 819 aaPredicted RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 RAET1GQ6H3X3 334 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 SLC30A9Q6PML9 568 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 UNC5DQ6UXZ4 953 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 ERN2Q76MJ5 926 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 YAF2Q8IY57 180 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 GALNT15Q8N3T1 639 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 TERB1Q8NA31 727 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 WDR34Q96EX3 536 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 APIPQ96GX9 242 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 TSSK3Q96PN8 268 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PKP4Q99569 1192 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 TRMT61BQ9BVS5 477 aaKnown RBP13.56□□□□□ -0.24
USF1-202ENST00000368020 OSBPL10Q9BXB5 764 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 TMEM245Q9H330 911 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 PIF1Q9H611 641 aa13.56□□□□□ -0.24
USF1-202ENST00000368020 SGK2Q9HBY8 427 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms