RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 GSCP56915 257 aaPredicted RBP11.28□□□□□ -0.6
SYNE1-204ENST00000367248 TMEM31Q5JXX7 168 aa11.28□□□□□ -0.6
SYNE1-204ENST00000367248 SLC22A15Q8IZD6 547 aa11.28□□□□□ -0.6
SYNE1-204ENST00000367248 CIB1Q99828 191 aa11.28□□□□□ -0.6
SYNE1-204ENST00000367248 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
SYNE1-204ENST00000367248 RACGAP1Q9H0H5 632 aa11.28□□□□□ -0.6
SYNE1-204ENST00000367248 GLOD5A6NK44 160 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 CXCR6O00574 342 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 RBMXL2O75526 392 aaKnown RBP11.27□□□□□ -0.6
SYNE1-204ENST00000367248 SUOXP51687 545 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 NR1H2P55055 460 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 ARSJQ5FYB0 599 aaPredicted RBP11.27□□□□□ -0.6
SYNE1-204ENST00000367248 PLEKHS1Q5SXH7 462 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 RSBN1Q5VWQ0 802 aaPredicted RBP11.27□□□□□ -0.6
SYNE1-204ENST00000367248 PTCHD4Q6ZW05 846 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 TRPV1Q8NER1 839 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 SLC5A11Q8WWX8 675 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 NSMCE3Q96MG7 304 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 NUAK2Q9H093 628 aa11.27□□□□□ -0.6
SYNE1-204ENST00000367248 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 G3V2T6 193 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 EBLN1P0CF75 366 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 THEGLP0DJG4 465 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 CCNOP22674 350 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 MPIP34949 423 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 LEPRP48357 1165 aaKnown RBP11.27□□□□□ -0.61
SYNE1-204ENST00000367248 AFF1P51825 1210 aaKnown RBP11.27□□□□□ -0.61
SYNE1-204ENST00000367248 FBXO43Q4G163 708 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 IFI44LQ53G44 452 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 SPIN4Q56A73 249 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 SPANXN2Q5MJ10 180 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 DCST1Q5T197 706 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 TMEFF1Q8IYR6 380 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 FGF13Q92913 245 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 KCNH6Q9H252 994 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 IFT80Q9P2H3 777 aaPredicted RBP11.27□□□□□ -0.61
SYNE1-204ENST00000367248 NOX1Q9Y5S8 564 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 PIM1P11309 404 aaPredicted RBP11.27□□□□□ -0.61
SYNE1-204ENST00000367248 PFKLP17858 780 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 RIN1Q13671 783 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 RANBP3LQ86VV4 465 aaPredicted RBP11.27□□□□□ -0.61
SYNE1-204ENST00000367248 FAM47BQ8NA70 645 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 NAXEQ8NCW5 288 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 OR9A1PQ8NGU1 263 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 GRHL3Q8TE85 626 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 SPATA9Q9BWV2 254 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 TAS2R1Q9NYW7 299 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 CENPXA8MT69 81 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 H0YC42 278 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 MT-ND1P03886 318 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 PTPRZ1P23471 2315 aaPredicted RBP11.27□□□□□ -0.61
SYNE1-204ENST00000367248 HMGCLP35914 325 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 ZNF252P-AS1Q0IIN9 211 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 CST6Q15828 149 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 DEFB133Q30KQ1 61 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 TRIQKQ629K1 86 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 GOLGA7Q7Z5G4 137 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 APCDD1Q8J025 514 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 ARL10Q8N8L6 244 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 AKTIPQ9H8T0 292 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 ACSL5Q9ULC5 683 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 DHRS7Q9Y394 339 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 ALS2Q96Q42 1657 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 DLG5Q8TDM6 1919 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 ITM2AO43736 263 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 KLK1P06870 262 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 MTPNP58546 118 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 NIPAL4Q0D2K0 466 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 NPWQ8N729 165 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 OR5AK3PQ8NH89 298 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 TCEAL4Q96EI5 215 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 CPEB1Q9BZB8 566 aaKnown RBP11.27□□□□□ -0.61
SYNE1-204ENST00000367248 STMN3Q9NZ72 180 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 HCFC2Q9Y5Z7 792 aa11.27□□□□□ -0.61
SYNE1-204ENST00000367248 EFCAB10A6NFE3 127 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 HIDE1A8MVS5 230 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 TMEM233B4DJY2 109 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 STX16-NPEPL1H3BU86 382 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 STX16O14662 325 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 RPL5P46777 297 aaKnown RBP11.26□□□□□ -0.61
SYNE1-204ENST00000367248 CDH12P55289 794 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 HERC3Q15034 1050 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 SMU1Q2TAY7 513 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 PIH1D2Q8WWB5 315 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 ARFGEF2Q9Y6D5 1785 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 CAPN8A6NHC0 703 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 FADS2P1A8MWK0 482 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 ZBTB42B2RXF5 422 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 NPC1O15118 1278 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 OR1I1O60431 355 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 GLDCP23378 1020 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 LRRC69Q6ZNQ3 347 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 PIGWQ7Z7B1 504 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 ZHX1-C8orf76Q96EF9 292 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 MOCS1Q9NZB8 636 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 PTNP21246 168 aa11.26□□□□□ -0.61
SYNE1-204ENST00000367248 ZNF57Q68EA5 555 aaPredicted RBP11.26□□□□□ -0.61
SYNE1-204ENST00000367248 CENPNQ96H22 339 aaPredicted RBP11.26□□□□□ -0.61
SYNE1-204ENST00000367248 CADM1Q9BY67 442 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms