RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 STEAP4Q687X5 459 aa16.27■□□□□ 0.2
PRKN-202ENST00000366892 SYVN1Q86TM6 617 aa16.27■□□□□ 0.2
PRKN-202ENST00000366892 GPR135Q8IZ08 494 aa16.27■□□□□ 0.2
PRKN-202ENST00000366892 OR2L8Q8NGY9 312 aa16.27■□□□□ 0.2
PRKN-202ENST00000366892 MZB1Q8WU39 189 aa16.27■□□□□ 0.2
PRKN-202ENST00000366892 N4BP2L2Q92802 583 aaPredicted RBP16.27■□□□□ 0.2
PRKN-202ENST00000366892 FAM136AQ96C01 138 aa16.27■□□□□ 0.2
PRKN-202ENST00000366892 ABHD17AQ96GS6 310 aa16.27■□□□□ 0.2
PRKN-202ENST00000366892 EBNA1BP2Q99848 306 aaKnown RBP16.27■□□□□ 0.2
PRKN-202ENST00000366892 SLC7A5P2Q9GIP4 190 aa16.27■□□□□ 0.2
PRKN-202ENST00000366892 RUVBL2Q9Y230 463 aaKnown RBP16.27■□□□□ 0.2
PRKN-202ENST00000366892 HEMK1Q9Y5R4 338 aaPredicted RBP16.27■□□□□ 0.2
PRKN-202ENST00000366892 SPENQ96T58 3664 aaKnown RBP16.26■□□□□ 0.19
PRKN-202ENST00000366892 TCP11X1B4DZS4 312 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 SUV39H1O43463 412 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 OR2B3O76000 313 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 CAPN1P07384 714 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 CTSBP07858 339 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 RAB40ALP0C0E4 278 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 PKMP14618 531 aaKnown RBP16.26■□□□□ 0.19
PRKN-202ENST00000366892 MAGP20916 626 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 FRG1Q14331 258 aaKnown RBP16.26■□□□□ 0.19
PRKN-202ENST00000366892 GBX1Q14549 363 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 CCSMST1Q4G0I0 132 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 HHATQ5VTY9 493 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 PRICKLE2Q7Z3G6 844 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 DENND6AQ8IWF6 608 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 SYTL1Q8IYJ3 562 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 DNAJC22Q8N4W6 341 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 MGARPQ8TDB4 240 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 SLC22A18Q96BI1 424 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 NLNQ9BYT8 704 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 ZNF71Q9NQZ8 489 aaPredicted RBP16.26■□□□□ 0.19
PRKN-202ENST00000366892 INTS10Q9NVR2 710 aaKnown RBP16.26■□□□□ 0.19
PRKN-202ENST00000366892 VPS9D1Q9Y2B5 631 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 KLHL20Q9Y2M5 609 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 ARL2BPQ9Y2Y0 163 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 MAD1L1Q9Y6D9 718 aa16.26■□□□□ 0.19
PRKN-202ENST00000366892 CCT8L1PA6NM43 557 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 PRICKLE3O43900 615 aaPredicted RBP16.25■□□□□ 0.19
PRKN-202ENST00000366892 KRT38O76015 456 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 USP1O94782 785 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 MATN4O95460 622 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 HBQ1P09105 142 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 CREB1P16220 341 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 SLC18A2Q05940 514 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 CTBP1Q13363 440 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 THOC5Q13769 683 aaKnown RBP16.25■□□□□ 0.19
PRKN-202ENST00000366892 SF1Q15637 639 aaKnown RBP16.25■□□□□ 0.19
PRKN-202ENST00000366892 UGT8Q16880 541 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 PTCHD3Q3KNS1 767 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 ZNF470Q6ECI4 717 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 CNSTQ6PJW8 725 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 SPATA21Q7Z572 469 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 PTRH1Q86Y79 214 aaKnown RBP16.25■□□□□ 0.19
PRKN-202ENST00000366892 ENDOVQ8N8Q3 282 aaKnown RBP16.25■□□□□ 0.19
PRKN-202ENST00000366892 C9orf43Q8TAL5 461 aaPredicted RBP16.25■□□□□ 0.19
PRKN-202ENST00000366892 CDKL2Q92772 493 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 APOPT1Q96IL0 206 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 FOPNLQ96NB1 174 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 DPH2Q9BQC3 489 aaPredicted RBP16.25■□□□□ 0.19
PRKN-202ENST00000366892 VPS11Q9H270 941 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 AP1M2Q9Y6Q5 423 aa16.25■□□□□ 0.19
PRKN-202ENST00000366892 KRT87PA6NCN2 255 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 F7P08709 466 aaPredicted RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 SNRPAP09012 282 aaKnown RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 CCNFP41002 786 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 BDKRB1P46663 353 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 IL10RAQ13651 578 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 MPP2Q14168 576 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 ACSBG2Q5FVE4 666 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 FAM69BQ5VUD6 431 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 ZNF385CQ66K41 422 aaPredicted RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 CAPN12Q6ZSI9 719 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 TRIM42Q8IWZ5 723 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 ZBTB2Q8N680 514 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 LRRC8CQ8TDW0 803 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 THAP4Q8WY91 577 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 RAB11FIP5Q9BXF6 653 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 FBXO6Q9NRD1 293 aaPredicted RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 C20orf96Q9NUD7 363 aaPredicted RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 TSR3Q9UJK0 312 aaKnown RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 TCFL5Q9UL49 500 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 PLCL2Q9UPR0 1127 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 MAN2B2Q9Y2E5 1009 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 E5RI56 91 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 BANF1O75531 89 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 CBSLP0DN79 551 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 KRT4P19013 534 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 TAC1P20366 129 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 AGXTP21549 392 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 CBSP35520 551 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 CLCN7P51798 805 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 WDR4P57081 412 aaKnown RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 ACTN3Q08043 901 aaPredicted RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 KBTBD12Q3ZCT8 623 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 HP1BP3Q5SSJ5 553 aaPredicted RBP16.24■□□□□ 0.19
PRKN-202ENST00000366892 RHBDD2Q6NTF9 364 aa16.24■□□□□ 0.19
PRKN-202ENST00000366892 ZNF549Q6P9A3 640 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms