RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TBC1D3KA0A087X1G2 549 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3FA6NER0 549 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3LB9A6J9 549 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 PROM1O43490 865 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SLC35G4P0C7Q5 338 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3HP0C7X1 549 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 HTR2AP28223 471 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SSR2P43308 183 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3GQ6DHY5 549 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3CQ6IPX1 549 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 TBC1D3Q8IZP1 549 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 FAM83FQ8NEG4 500 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 UPF1Q92900 1129 aaKnown RBP eCLIP10.82□□□□□ -0.682e-6■■□□□ 12.6
CDC42BPA-205ENST00000366769 MS4A12Q9NXJ0 267 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 FFAR2O15552 330 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SULT1B1O43704 296 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 SLC6A9P48067 706 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 AFF3P51826 1226 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 C2CD4CQ8TF44 421 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 RRNAD1Q96FB5 475 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 NECTIN4Q96NY8 510 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 GAL3ST4Q96RP7 486 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 RIT2Q99578 217 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 MGME1Q9BQP7 344 aa10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 MRTO4Q9UKD2 239 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-205ENST00000366769 ANXA2P2A6NMY6 339 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 ANXA2P07355 339 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 RAB5CP51148 216 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 SNRPD1P62314 119 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 LAMTOR4Q0VGL1 99 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 LMLNQ96KR4 655 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 TM9SF2Q99805 663 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 BRD9Q9H8M2 597 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 RNF121Q9H920 327 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 WNT7AO00755 349 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 FHP07954 510 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 IDUAP35475 653 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 RAB33AQ14088 237 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 SAMD7Q7Z3H4 446 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 STRA6Q9BX79 667 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 GCATO75600 419 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 RAP2AP10114 183 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 SCGB2B2Q4G0G5 96 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 FAM151BQ6UXP7 276 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 GPALPP1Q8IXQ4 340 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 MYOZ2Q9NPC6 264 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 MED31Q9Y3C7 131 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 TMEM150BA6NC51 233 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 MT-ND2P03891 347 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 PPP3CAQ08209 521 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 FAM189A2Q15884 450 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 GCNT6Q5T4J0 391 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 C9orf64Q5T6V5 341 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 WASH2PQ6VEQ5 465 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 CADM3Q8N126 398 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 PYROXD2Q8N2H3 581 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 FDXACB1Q9BRP7 624 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 TKTL2Q9H0I9 626 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 TSPAN16Q9UKR8 245 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 GPR89AB7ZAQ6 455 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 ARPC5O15511 151 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 GPR89BP0CG08 455 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 BEND4Q6ZU67 534 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 YIPF7Q8N8F6 280 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 DNAAF1Q8NEP3 725 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 THRSPQ92748 146 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 ROPN1LQ96C74 230 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 PPCDCQ96CD2 204 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 ZSWIM3Q96MP5 696 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 HOPXQ9BPY8 73 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 DEFB129Q9H1M3 183 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 GBA3Q9H227 469 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 NXF3Q9H4D5 531 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 ENY2Q9NPA8 101 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 EVLQ9UI08 416 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 MDFIC2A0A1B0GVS7 189 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 PLGP00747 810 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 PRKACGP22612 351 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 ERVK-21P61565 698 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 VTCN1Q7Z7D3 282 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 KBTBD6Q86V97 674 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 SLC2A14Q8TDB8 520 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 CPT1BQ92523 772 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 HAPLN3Q96S86 360 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 TCEAL7Q9BRU2 100 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 KANSL3Q9P2N6 904 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 CDH7Q9ULB5 785 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 MAN2B2Q9Y2E5 1009 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 C13orf42A0A1B0GVH6 325 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 RFXANKO14593 260 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 TGM6O95932 706 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 FAM174BQ3ZCQ3 159 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 FAM205BPQ63HN1 556 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 NUP54Q7Z3B4 507 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 ANKRD53Q8N9V6 530 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 LRRC46Q96FV0 321 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 HRH3Q9Y5N1 445 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 SPTBN2O15020 2390 aa10.81□□□□□ -0.68
CDC42BPA-205ENST00000366769 NPIPA7E9PJI5 369 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms