RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 PAX1P15863 534 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 VCLP18206 1134 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 CSTF2P33240 577 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 DCTP40126 519 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 NPBWR1P48145 328 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 GAS1P54826 345 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 ADARP55265 1226 aaKnown RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 KIAA1024LP59773 190 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 AP1B1Q10567 949 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 TEFQ10587 303 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 RPA4Q13156 261 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 LASP1Q14847 261 aaKnown RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 RPS6KA1Q15418 735 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 TAF13Q15543 124 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 RBBP7Q16576 425 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 ACCSLQ4AC99 568 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 PDLIM3Q53GG5 364 aaPredicted RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 TECRLQ5HYJ1 363 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 SLC35D3Q5M8T2 416 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 C9orf139Q6ZV77 190 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 GPR141Q7Z602 305 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 PIGWQ7Z7B1 504 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 RTN4RL2Q86UN3 420 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 ANKRD46Q86W74 232 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 MEX3DQ86XN8 651 aaKnown RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 CDK20Q8IZL9 346 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 EID3Q8N140 333 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 DNAJC22Q8N4W6 341 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 RFLNBQ8N5W9 214 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 MAB21L3Q8N8X9 362 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 MGARPQ8TDB4 240 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 UBLCP1Q8WVY7 318 aaPredicted RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 CKAP2Q8WWK9 683 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 BCL2L2Q92843 193 aaPredicted RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 ATP6V0BQ99437 205 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 URM1Q9BTM9 101 aaKnown RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 CDK19Q9BWU1 502 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 SDCBP2Q9H190 292 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 CPVLQ9H3G5 476 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 UPF2Q9HAU5 1272 aaKnown RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 PNPLA3Q9NST1 481 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 FAF1Q9UNN5 650 aaPredicted RBP3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 KLK4Q9Y5K2 254 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 ACEP12821 1306 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 IL16Q14005 1332 aa3.42□□□□□ -1.86
RNU6-28P-201ENST00000362378 GPRASP1Q5JY77 1395 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 C13orf42A0A1B0GVH6 325 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 PRSS46E5RG02 174 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 SLC22A2O15244 555 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 TTI1O43156 1089 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 KERAO60938 352 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 OLFM2O95897 454 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 MT-ND3P03897 115 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 STAG3L1P0CL83 205 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 MARK3P27448 753 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 OR3A1P47881 315 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 HERV-K104P61576 105 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 POU3F1Q03052 451 aaPredicted RBP3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 ARHGAP1Q07960 439 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 IL10RBQ08334 325 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 HERC3Q15034 1050 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 AARDQ4LEZ3 155 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 XKR3Q5GH77 459 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 C20orf194Q5TEA3 1177 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 WBP2NLQ6ICG8 309 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 ALKBH5Q6P6C2 394 aaKnown RBP3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 ZNF771Q7L3S4 317 aaPredicted RBP3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 CHCHD4Q8N4Q1 142 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 KLHDC9Q8NEP7 349 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 NSL1Q96IY1 281 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 NDNQ99608 321 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 CCDC3Q9BQI4 270 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 RHNO1Q9BSD3 238 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 TRMT61BQ9BVS5 477 aaKnown RBP3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 ACAT2Q9BWD1 397 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 OR2B2Q9GZK3 357 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 UBQLN3Q9H347 655 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 CHST11Q9NPF2 352 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 PHPT1Q9NRX4 125 aaPredicted RBP3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 FAM207AQ9NSI2 230 aaPredicted RBP3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 ECHDC1Q9NTX5 307 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 FAM118AQ9NWS6 357 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 SPG21Q9NZD8 308 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 FLRT3Q9NZU0 649 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 TRPC4Q9UBN4 977 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 CHKBQ9Y259 395 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 HBS1LQ9Y450 684 aaKnown RBP3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 RIPK3Q9Y572 518 aa3.41□□□□□ -1.86
RNU6-28P-201ENST00000362378 ABCC9O60706 1549 aa3.4□□□□□ -1.86
RNU6-28P-201ENST00000362378 BICDL2A1A5D9 508 aa3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 SMIM30A4D0T7 59 aa3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 C17orf105B2RV13 164 aa3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 NPIPA3F8WFD2 350 aa3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 HTATSF1O43719 755 aaKnown RBP3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 RAD51DO75771 328 aa3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 AKAP3O75969 853 aa3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 GLCEO94923 617 aa3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 BAG3O95817 575 aa3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 F7P08709 466 aaPredicted RBP3.4□□□□□ -1.87
RNU6-28P-201ENST00000362378 THEGLP0DJG4 465 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms