RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CHRAC1Q9NRG0 131 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 TRPC4Q9UBN4 977 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 GNPTGQ9UJJ9 305 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 KLF2Q9Y5W3 355 aaPredicted RBP20.09■□□□□ 0.81
CD47-202ENST00000361309 MRFAP1Q9Y605 127 aa20.09■□□□□ 0.81
CD47-202ENST00000361309 IGHV1-45A0A0A0MS14 117 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 TRGV8A0A0C4DH27 118 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 MIF4GDA9UHW6 222 aaKnown RBP20.08■□□□□ 0.81
CD47-202ENST00000361309 H0YGG7 62 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 KPNA5O15131 536 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 WFS1O76024 890 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 BMP10O95393 424 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 FTCDO95954 541 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 CCNFP41002 786 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 ARF3P61204 181 aaPredicted RBP20.08■□□□□ 0.81
CD47-202ENST00000361309 SKOR2Q2VWA4 1001 aaPredicted RBP20.08■□□□□ 0.81
CD47-202ENST00000361309 PRUNE1Q86TP1 453 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 PPHLN1Q8NEY8 458 aaKnown RBP20.08■□□□□ 0.81
CD47-202ENST00000361309 FOPNLQ96NB1 174 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 SUCOQ9UBS9 1254 aaKnown RBP20.08■□□□□ 0.81
CD47-202ENST00000361309 TSR3Q9UJK0 312 aaKnown RBP20.08■□□□□ 0.81
CD47-202ENST00000361309 CDC14AQ9UNH5 594 aa20.08■□□□□ 0.81
CD47-202ENST00000361309 MRPS2Q9Y399 296 aaKnown RBP20.08■□□□□ 0.81
CD47-202ENST00000361309 C2CD3Q4AC94 2353 aa20.08■□□□□ 0.8
CD47-202ENST00000361309 A0A1W2PQ72 361 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 UNC5CO95185 931 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 ETS1P14921 441 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 MST1P26927 711 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 CMPK1P30085 196 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 DSG2Q14126 1118 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 OASLQ15646 514 aaKnown RBP20.07■□□□□ 0.8
CD47-202ENST00000361309 TMEM207Q6UWW9 146 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 AMER2Q8N7J2 671 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 MAGEC3Q8TD91 643 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 CCDC120Q96HB5 630 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 SYNPO2LQ9H987 977 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 RAB6BQ9NRW1 208 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 RIC8BQ9NVN3 520 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 SPATA7Q9P0W8 599 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 NCOA6Q14686 2063 aaPredicted RBP20.07■□□□□ 0.8
CD47-202ENST00000361309 CACNA1CQ13936 2221 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 SCN3AQ9NY46 2000 aa20.07■□□□□ 0.8
CD47-202ENST00000361309 CCL21O00585 134 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 LIASO43766 372 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 NDUFS3O75489 264 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 RASAL1O95294 804 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 WDPCPO95876 746 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 HEXBP07686 556 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 APRTP07741 180 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 ITGAMP11215 1152 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 EMP3P54852 163 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 NAA25Q14CX7 972 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 RIPOR1Q6ZS17 1223 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 MRGPRGQ86SM5 289 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 KIAA1328Q86T90 577 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 LRRC6Q86X45 466 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 SYCE1Q8N0S2 351 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 MMABQ96EY8 250 aaPredicted RBP20.06■□□□□ 0.8
CD47-202ENST00000361309 C14orf105Q9NVL8 296 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 ABI3Q9P2A4 366 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 RUVBL1Q9Y265 456 aaKnown RBP20.06■□□□□ 0.8
CD47-202ENST00000361309 GTF3C1Q12789 2109 aa20.06■□□□□ 0.8
CD47-202ENST00000361309 PRPF4O43172 522 aaKnown RBP eCLIP20.05■□□□□ 0.8
CD47-202ENST00000361309 VPS26AO75436 327 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 RPS3P23396 243 aaKnown RBP eCLIP20.05■□□□□ 0.8
CD47-202ENST00000361309 SLC26A3P40879 764 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 EIF3BP55884 814 aaKnown RBP20.05■□□□□ 0.8
CD47-202ENST00000361309 CRADDP78560 199 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 PCOLCEQ15113 449 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 HKDC1Q2TB90 917 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 PCID2Q5JVF3 399 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 CTSL3PQ5NE16 218 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 HIBCHQ6NVY1 386 aaPredicted RBP20.05■□□□□ 0.8
CD47-202ENST00000361309 SUSD1Q6UWL2 747 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 CSNK1A1LQ8N752 337 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 AMER3Q8N944 861 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 MVB12AQ96EY5 273 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 PLCD4Q9BRC7 762 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 MRPS30Q9NP92 439 aaKnown RBP20.05■□□□□ 0.8
CD47-202ENST00000361309 SEC14L3Q9UDX4 400 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 SH3BGRL2Q9UJC5 107 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 ZNF148Q9UQR1 794 aa20.05■□□□□ 0.8
CD47-202ENST00000361309 A0A0U1RQJ8 604 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 MATN4O95460 622 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 CRYABP02511 175 aaKnown RBP20.04■□□□□ 0.8
CD47-202ENST00000361309 SNRPB2P08579 225 aaKnown RBP20.04■□□□□ 0.8
CD47-202ENST00000361309 ANXA5P08758 320 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 HTR1EP28566 365 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 SESN2P58004 480 aaPredicted RBP20.04■□□□□ 0.8
CD47-202ENST00000361309 ZXDCQ2QGD7 858 aaPredicted RBP20.04■□□□□ 0.8
CD47-202ENST00000361309 LRRC8BQ6P9F7 803 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 BNC2Q6ZN30 1099 aaPredicted RBP20.04■□□□□ 0.8
CD47-202ENST00000361309 PAQR7Q86WK9 346 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 MPP5Q8N3R9 675 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 ZNF808Q8N4W9 903 aaPredicted RBP20.04■□□□□ 0.8
CD47-202ENST00000361309 OR9A1PQ8NGU1 263 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 DNAJB8Q8NHS0 232 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 SUN3Q8TAQ9 357 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 C1orf54Q8WWF1 131 aa20.04■□□□□ 0.8
CD47-202ENST00000361309 HES6Q96HZ4 224 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms