RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TRPS1Q9UHF7 1281 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 ZNF490Q9ULM2 529 aaPredicted RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 IQCF5A8MTL0 148 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 CHN1P15882 459 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 PSMD4P55036 377 aaKnown RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 BNIP3Q12983 259 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 PGS1Q32NB8 556 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 CMC1Q7Z7K0 106 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 TCP10LQ8TDR4 215 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 SCRG1O75711 98 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 IMPDH1P20839 514 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 CYP4F2P78329 520 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 MLIPQ5VWP3 458 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 TRMT10BQ6PF06 316 aaKnown RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 WDR74Q6RFH5 385 aaPredicted RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 SPATA19Q7Z5L4 167 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 MFSD9Q8NBP5 474 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 SLC37A2Q8TED4 501 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 TBC1D10AQ9BXI6 508 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 GID8Q9NWU2 228 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 HCN3Q9P1Z3 774 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 OR52A4PA6NMU1 304 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 TARM1B6A8C7 271 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 PSIP1O75475 530 aaKnown RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 SERPINB4P48594 390 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 MSS51Q4VC12 460 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 RBM20Q5T481 1227 aaKnown RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 HES3Q5TGS1 186 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 ATG9BQ674R7 924 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 ZSWIM9Q86XI8 627 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 MCATQ8IVS2 390 aaKnown RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 CD200R1Q8TD46 325 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 TBCDQ9BTW9 1192 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 CLK4Q9HAZ1 481 aaKnown RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 CAPN10Q9HC96 672 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 ATP6V1C1P21283 382 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 MTTPP55157 894 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 NRG3P56975 720 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SLC13A2Q13183 592 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 MINDY4Q4G0A6 757 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 CACNA2D3Q8IZS8 1091 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 TAGAPQ8N103 731 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 ZNF248Q8NDW4 579 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 LRGUKQ96M69 825 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 OR6C1Q96RD1 312 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SERINC2Q96SA4 455 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 STOX2Q9P2F5 926 aaPredicted RBP8.87□□□□□ -0.99
UPF2-202ENST00000357604 RAP2CQ9Y3L5 183 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 TRBC2A0A5B9 178 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SLC9B1P1A6NJY1 282 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 H0YHG0 523 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 TNFSF15O95150 251 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 FTH1P19P0C7X4 201 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 MAGEA3P43357 314 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 KCNC1P48547 511 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 METAP1P53582 386 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 BTN3A2P78410 334 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 ZNF844Q08AG5 666 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 C16orf46Q6P387 395 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 TMIGD1Q6UXZ0 262 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SFRP1Q8N474 314 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SAP25Q8TEE9 199 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 JPH3Q8WXH2 748 aaPredicted RBP8.87□□□□□ -0.99
UPF2-202ENST00000357604 FER1L6-AS2Q96M78 137 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 DCBLD2Q96PD2 775 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 KCNC2Q96PR1 638 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 DPH7Q9BTV6 452 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 P2RY12Q9H244 342 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SMOC1Q9H4F8 434 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 ACSS2Q9NR19 701 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 TMED5Q9Y3A6 229 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 UBXN8O00124 270 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 MAPK12P53778 367 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 GPX6P59796 221 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 IL11RAQ14626 422 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 NKAIN2Q5VXU1 208 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 NAPRTQ6XQN6 538 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 GOLGA7Q7Z5G4 137 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SPATA6LQ8N4H0 392 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 FNDC5Q8NAU1 212 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 PCYOX1LQ8NBM8 494 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 CCDC197Q8NCU1 140 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 EZH1Q92800 747 aaPredicted RBP8.87□□□□□ -0.99
UPF2-202ENST00000357604 ZNF578Q96N58 590 aaPredicted RBP8.87□□□□□ -0.99
UPF2-202ENST00000357604 DHRS4Q9BTZ2 278 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 TWSG1Q9GZX9 223 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 ANGPTL2Q9UKU9 493 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SLC5A10A0PJK1 596 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 EVPLLA8MZ36 301 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 COQ9O75208 318 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 CCR7P32248 378 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 DNAJB13P59910 316 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 PSPHP78330 225 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 HEPACAMQ14CZ8 416 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 TGFBIQ15582 683 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 PDCD2Q16342 344 aaPredicted RBP8.87□□□□□ -0.99
UPF2-202ENST00000357604 SLC29A4Q7RTT9 530 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SLC26A7Q8TE54 656 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 FCRL4Q96PJ5 515 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 SH3GL1Q99961 368 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms