RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 ZNF572Q7Z3I7 529 aaPredicted RBP16.43■□□□□ 0.22
NCL-202ENST00000356936 STRA8Q7Z7C7 330 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 PAQR7Q86WK9 346 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 RERGQ96A58 199 aaPredicted RBP16.43■□□□□ 0.22
NCL-202ENST00000356936 NACC2Q96BF6 587 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 PTERQ96BW5 349 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 WDR54Q9H977 334 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 ZNF71Q9NQZ8 489 aaPredicted RBP16.43■□□□□ 0.22
NCL-202ENST00000356936 STOX2Q9P2F5 926 aaPredicted RBP16.43■□□□□ 0.22
NCL-202ENST00000356936 SLC17A6Q9P2U8 582 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 ANAPC2Q9UJX6 822 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 TLK1Q9UKI8 766 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 PDE10AQ9Y233 779 aa16.43■□□□□ 0.22
NCL-202ENST00000356936 PTRH2Q9Y3E5 179 aaKnown RBP16.43■□□□□ 0.22
NCL-202ENST00000356936 PEX12O00623 359 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 TXNDC9O14530 226 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 EIF2S1P05198 315 aaKnown RBP16.42■□□□□ 0.22
NCL-202ENST00000356936 AP1S2P56377 157 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 MRPS25P82663 173 aaKnown RBP16.42■□□□□ 0.22
NCL-202ENST00000356936 MUM1Q2TAK8 710 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 ZNF425Q6IV72 752 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 OVCH1Q7RTY7 1134 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 ADCK2Q7Z695 626 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 LRRC56Q8IYG6 542 aaPredicted RBP16.42■□□□□ 0.22
NCL-202ENST00000356936 CDKL2Q92772 493 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 VPS39Q96JC1 886 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 PHACTR1Q9C0D0 580 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 ABCF3Q9NUQ8 709 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 NXT1Q9UKK6 140 aaKnown RBP16.42■□□□□ 0.22
NCL-202ENST00000356936 ADAMTS6Q9UKP5 1117 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 TP53TG5Q9Y2B4 290 aa16.42■□□□□ 0.22
NCL-202ENST00000356936 PCDHGA9Q9Y5G4 932 aaKnown RBP16.42■□□□□ 0.22
NCL-202ENST00000356936 ATRXP46100 2492 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 LOC105369274A0A096LPK9 316 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 IGKV1-8A0A0C4DH67 115 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 LOC102723532A0A0G2JNH3 316 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 H0YGG7 62 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 ENO2P09104 434 aaPredicted RBP16.41■□□□□ 0.22
NCL-202ENST00000356936 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 OTX2P32243 289 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 ARF3P61204 181 aaPredicted RBP16.41■□□□□ 0.22
NCL-202ENST00000356936 TBPL1P62380 186 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 YBX1P67809 324 aaKnown RBP16.41■□□□□ 0.22
NCL-202ENST00000356936 SLC9A5Q14940 896 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 FAM69BQ5VUD6 431 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 PRAMEF13Q5VWM6 474 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 AGTRAPQ6RW13 159 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 ASB18Q6ZVZ8 466 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 CYS1Q717R9 158 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 ZC3HC1Q86WB0 502 aaKnown RBP16.41■□□□□ 0.22
NCL-202ENST00000356936 PTRH1Q86Y79 214 aaKnown RBP16.41■□□□□ 0.22
NCL-202ENST00000356936 OR4N4Q8N0Y3 316 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 ATL1Q8WXF7 558 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 PDLIM5Q96HC4 596 aaKnown RBP16.41■□□□□ 0.22
NCL-202ENST00000356936 FER1L6-AS2Q96M78 137 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 SLC25A23Q9BV35 468 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 TRIM55Q9BYV6 548 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 SLC26A1Q9H2B4 701 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 SAYSD1Q9NPB0 183 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 TMEM184CQ9NVA4 438 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 ARL15Q9NXU5 204 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 GRHL1Q9NZI5 618 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 TXNDC16Q9P2K2 825 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 CDC14AQ9UNH5 594 aa16.41■□□□□ 0.22
NCL-202ENST00000356936 PRPF4O43172 522 aaKnown RBP eCLIP16.4■□□□□ 0.228e-8■■□□□ 12.1
NCL-202ENST00000356936 NRP2O60462 931 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 DNAJB5O75953 348 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 TSPAN12O95859 305 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 GSTA2P09210 222 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 ITGAXP20702 1163 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 CCL11P51671 97 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 PGDP52209 483 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 ATP1A4Q13733 1029 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 PRTGQ2VWP7 1150 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 GARNL3Q5VVW2 1013 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 CPZQ66K79 652 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 MRGPREQ86SM8 312 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 NKAPQ8N5F7 415 aaKnown RBP16.4■□□□□ 0.22
NCL-202ENST00000356936 CSNK1A1LQ8N752 337 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 ANKRD7Q92527 254 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 MVB12AQ96EY5 273 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 CABS1Q96KC9 395 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 C16orf45Q96MC5 204 aaPredicted RBP16.4■□□□□ 0.22
NCL-202ENST00000356936 OR2A5Q96R48 311 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 OLFM1Q99784 485 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 RHOJQ9H4E5 214 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 ZNF304Q9HCX3 659 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 SLC22A11Q9NSA0 550 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 CDC23Q9UJX2 597 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 PCDHGB7Q9Y5F8 929 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 PSAT1Q9Y617 370 aa16.4■□□□□ 0.22
NCL-202ENST00000356936 FAM95CA0A1B0GW59 222 aa16.39■□□□□ 0.21
NCL-202ENST00000356936 H7BY64 318 aa16.39■□□□□ 0.21
NCL-202ENST00000356936 KLHL41O60662 606 aa16.39■□□□□ 0.21
NCL-202ENST00000356936 ZNF37AP17032 561 aaPredicted RBP16.39■□□□□ 0.21
NCL-202ENST00000356936 SAT1P21673 171 aa16.39■□□□□ 0.21
NCL-202ENST00000356936 CASRP41180 1078 aa16.39■□□□□ 0.21
NCL-202ENST00000356936 SLC12A2P55011 1212 aa16.39■□□□□ 0.21
NCL-202ENST00000356936 PLTPP55058 493 aa16.39■□□□□ 0.21
NCL-202ENST00000356936 RPS15AP62244 130 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms