RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 PCDHGA2Q9Y5H1 932 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 MAU2Q9Y6X3 613 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 A0A0G2JLL6 359 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 B4DGG1 531 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 NPPAP01160 153 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ANXA3P12429 323 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 MAT2AP31153 395 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 SLC6A6P31641 620 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 BMP8BP34820 402 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 YAP1P46937 504 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 TUBA1BP68363 451 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 DGKZQ13574 1117 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 PDE12Q6L8Q7 609 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 TUBA1AQ71U36 451 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 BMP8AQ7Z5Y6 402 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 PRRT2Q7Z6L0 340 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 PAQR7Q86WK9 346 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 CHERPQ8IWX8 916 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 NETO2Q8NC67 525 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ARNTL2Q8WYA1 636 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 CITED4Q96RK1 184 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 FEM1AQ9BSK4 669 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TRMT61BQ9BVS5 477 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 ITPAQ9BY32 194 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SLC2A11Q9BYW1 496 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 NELFAQ9H3P2 528 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 MRM3Q9HC36 420 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 MLXQ9UH92 298 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 PMF1-BGLAPU3KQ54 211 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 A0A1B0GVI7 797 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 FAM149AA5PLN7 773 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 M0R129 80 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 HAS3O00219 553 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TPST2O60704 377 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 BPNT1O95861 308 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 INHAP05111 366 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 CFIP05156 583 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 PET100P0DJ07 73 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 PSKH1P11801 424 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 SRCP12931 536 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 POU2F1P14859 743 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 NCK1P16333 377 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 DHPSP49366 369 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 ARRB1P49407 418 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 DUSP3P51452 185 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 DGKEP52429 567 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 CAPZA1P52907 286 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 AP2S1P53680 142 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 SEMA3AQ14563 771 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 RHEBQ15382 184 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TRAM1Q15629 374 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ZNF630Q2M218 657 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 ADGRF1Q5T601 910 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 MBLAC2Q68D91 279 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 CWF19L1Q69YN2 538 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 RAB11FIP2Q7L804 512 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 LGI4Q8N135 537 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 GRHL3Q8TE85 626 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 NDRG1Q92597 394 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 PMM1Q92871 262 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TNFRSF25Q93038 417 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ASB9Q96DX5 294 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ZFP3Q96NJ6 502 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ZNF446Q9NWS9 450 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 FAM120CQ9NX05 1096 aaKnown RBP6.31□□□□□ -1.4
UPF2-201ENST00000356352 SIRPGQ9P1W8 387 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 RIMKLBQ9ULI2 386 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 ARL5AQ9Y689 179 aa6.31□□□□□ -1.4
UPF2-201ENST00000356352 UNCXA6NJT0 531 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 GPR25O00155 361 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ENPP3O14638 875 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 H6PDO95479 791 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CST3P01034 146 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 HLA-DPB1P04440 258 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 GRIA1P42261 906 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 KCNJ5P48544 419 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 CHAF1BQ13112 559 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 FASTKD3Q14CZ7 662 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 SEC23BQ15437 767 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 QPCTQ16769 361 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 AMZ1Q400G9 498 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 PLEKHN1Q494U1 663 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 ARSIQ5FYB1 569 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ARHGAP40Q5TG30 622 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 VWA5B1Q5TIE3 1220 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 FRG2Q64ET8 278 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ZNF101Q8IZC7 436 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 TMEM156Q8N614 296 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 ZSCAN1Q8NBB4 408 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 KIAA1143Q96AT1 154 aaPredicted RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 ZC3H10Q96K80 434 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 FRG2BQ96QU4 278 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 GFM1Q96RP9 751 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 ORAI3Q9BRQ5 295 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 RIOK2Q9BVS4 552 aaKnown RBP6.3□□□□□ -1.4
UPF2-201ENST00000356352 STRADBQ9C0K7 418 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 OXSMQ9NWU1 459 aa6.3□□□□□ -1.4
UPF2-201ENST00000356352 GRHL1Q9NZI5 618 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms