RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MFSD4BQ5TF39 518 aa9.85□□□□□ -0.83
PTPRA-203ENST00000356147 ATG9BQ674R7 924 aa9.85□□□□□ -0.83
PTPRA-203ENST00000356147 ZNF467Q7Z7K2 595 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-203ENST00000356147 PEX13Q92968 403 aa9.85□□□□□ -0.83
PTPRA-203ENST00000356147 EFHD2Q96C19 240 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-203ENST00000356147 SUSD3Q96L08 255 aa9.85□□□□□ -0.83
PTPRA-203ENST00000356147 CD244Q9BZW8 370 aa9.85□□□□□ -0.83
PTPRA-203ENST00000356147 SP140LQ9H930 580 aa9.85□□□□□ -0.83
PTPRA-203ENST00000356147 EXOSC4Q9NPD3 245 aaKnown RBP9.85□□□□□ -0.83
PTPRA-203ENST00000356147 FBXL12Q9NXK8 326 aa9.85□□□□□ -0.83
PTPRA-203ENST00000356147 TBC1D14Q9P2M4 693 aa9.85□□□□□ -0.83
PTPRA-203ENST00000356147 FCF1Q9Y324 198 aaKnown RBP9.85□□□□□ -0.83
PTPRA-203ENST00000356147 USP34Q70CQ2 3546 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 DRGXA6NNA5 263 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 TPD52L2O43399 206 aaKnown RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 BNIP3LO60238 219 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 GJB5O95377 273 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 PRAMEF1O95521 474 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 ESR1P03372 595 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 ADRA2AP08913 450 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 EPB42P16452 691 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 SDC1P18827 310 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 FPR1P21462 350 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 ITPKAP23677 461 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 YBEYP58557 167 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 MED22Q15528 200 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 ARMCX4Q5H9R4 360 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 NRARPQ7Z6K4 114 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 GALNT13Q8IUC8 556 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 SPPL2AQ8TCT8 520 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 ZNF675Q8TD23 568 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 OR5M11Q96RB7 305 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 CDK5RAP1Q96SZ6 601 aaKnown RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 FEVQ99581 238 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 FAM126AQ9BYI3 521 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 PCDHGB6Q9Y5F9 930 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 PIKFYVEQ9Y2I7 2098 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 GRXCR2A6NFK2 248 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 EVPLLA8MZ36 301 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 H3BM21 787 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 FPGTO14772 594 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 YY2O15391 372 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 KDELR2P33947 212 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 PTGER3P43115 390 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 CPT1AP50416 773 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 CDC20Q12834 499 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 KEAP1Q14145 624 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 IRF3Q14653 427 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 ZC3H12BQ5HYM0 836 aaKnown RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 TSPYL5Q86VY4 417 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 VANGL1Q8TAA9 524 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 SLC16A10Q8TF71 515 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 C17orf50Q8WW18 174 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 GGHQ92820 318 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 PDLIM5Q96HC4 596 aaKnown RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 TSEN34Q9BSV6 310 aaKnown RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 BBS2Q9BXC9 721 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 KCNH6Q9H252 994 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 MMP27Q9H306 513 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 ELOVL6Q9H5J4 265 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 MAGIXQ9H6Y5 334 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 TM9SF3Q9HD45 589 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 RGS17Q9UGC6 210 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 OGDHLQ9ULD0 1010 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 SAMD4AQ9UPU9 718 aaKnown RBP9.84□□□□□ -0.83
PTPRA-203ENST00000356147 PTPRDP23468 1912 aa9.84□□□□□ -0.83
PTPRA-203ENST00000356147 NT5C1B-RDH14C9J2C7 533 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 SLC28A1O00337 649 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ERN1O75460 977 aaKnown RBP9.83□□□□□ -0.84
PTPRA-203ENST00000356147 KCNK5O95279 499 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 RHOCP08134 193 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 CCL23P55773 120 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 OR2B6P58173 313 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ABHD18Q0P651 414 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 DUSP4Q13115 394 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 DMC1Q14565 340 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ZXDCQ2QGD7 858 aaPredicted RBP9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ATAD3CQ5T2N8 411 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 RNF219Q5W0B1 726 aaPredicted RBP9.83□□□□□ -0.84
PTPRA-203ENST00000356147 STX19Q8N4C7 294 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 AMER2Q8N7J2 671 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 IL17RDQ8NFM7 739 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 WBP2Q969T9 261 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ZFYVE19Q96K21 471 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 NECTIN4Q96NY8 510 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ATG10Q9H0Y0 220 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 P2RY12Q9H244 342 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 FBXO44Q9H4M3 255 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 DNMT3AQ9Y6K1 912 aaPredicted RBP9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ANKRD36A6QL64 1941 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 CLDN24A6NM45 220 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 LOC110117498-PIK3R3F6TDL0 507 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 CCNDBP1O95273 360 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 MAGEA2P43356 314 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 SMARCB1Q12824 385 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF181Q2M3W8 571 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 VMACQ2NL98 169 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 PROX2Q3B8N5 592 aa9.83□□□□□ -0.84
PTPRA-203ENST00000356147 UAP1L1Q3KQV9 507 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms