RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 CPSF7Q8N684 471 aaKnown RBP15.04■□□□□ -0
CTSA-202ENST00000354880 OR2A1Q8NGT9 310 aa15.04■□□□□ -0
CTSA-202ENST00000354880 WDR20Q8TBZ3 569 aa15.04■□□□□ -0
CTSA-202ENST00000354880 TUBB6Q9BUF5 446 aa15.04■□□□□ -0
CTSA-202ENST00000354880 GEMIN8Q9NWZ8 242 aaKnown RBP15.04■□□□□ -0
CTSA-202ENST00000354880 ZSCAN32Q9NX65 697 aa15.04■□□□□ -0
CTSA-202ENST00000354880 CCL27Q9Y4X3 112 aa15.04■□□□□ -0
CTSA-202ENST00000354880 COPG1Q9Y678 874 aaKnown RBP15.04■□□□□ -0
CTSA-202ENST00000354880 CAPN7Q9Y6W3 813 aa15.04■□□□□ -0
CTSA-202ENST00000354880 SERTM1A2A2V5 107 aa15.03■□□□□ -0
CTSA-202ENST00000354880 LMO7DNF2Z398 122 aa15.03■□□□□ -0
CTSA-202ENST00000354880 LSM1O15116 133 aaKnown RBP15.03■□□□□ -0
CTSA-202ENST00000354880 PRICKLE3O43900 615 aaPredicted RBP15.03■□□□□ -0
CTSA-202ENST00000354880 SDC3O75056 442 aa15.03■□□□□ -0
CTSA-202ENST00000354880 PIAS2O75928 621 aa15.03■□□□□ -0
CTSA-202ENST00000354880 CBX6O95503 412 aa15.03■□□□□ -0
CTSA-202ENST00000354880 ALDOCP09972 364 aaKnown RBP15.03■□□□□ -0
CTSA-202ENST00000354880 YBX1P67809 324 aaKnown RBP15.03■□□□□ -0
CTSA-202ENST00000354880 HMGCS1Q01581 520 aa15.03■□□□□ -0
CTSA-202ENST00000354880 HHEXQ03014 270 aa15.03■□□□□ -0
CTSA-202ENST00000354880 PRDX1Q06830 199 aaKnown RBP15.03■□□□□ -0
CTSA-202ENST00000354880 HIST2H2ACQ16777 129 aaPredicted RBP15.03■□□□□ -0
CTSA-202ENST00000354880 KIF19Q2TAC6 998 aa15.03■□□□□ -0
CTSA-202ENST00000354880 C6orf136Q5SQH8 315 aa15.03■□□□□ -0
CTSA-202ENST00000354880 HIST2H2AA3Q6FI13 130 aa15.03■□□□□ -0
CTSA-202ENST00000354880 MED27Q6P2C8 311 aa15.03■□□□□ -0
CTSA-202ENST00000354880 FAM129CQ86XR2 697 aa15.03■□□□□ -0
CTSA-202ENST00000354880 RBM12BQ8IXT5 1001 aaKnown RBP15.03■□□□□ -0
CTSA-202ENST00000354880 OR7G3Q8NG95 312 aa15.03■□□□□ -0
CTSA-202ENST00000354880 PIGKQ92643 395 aa15.03■□□□□ -0
CTSA-202ENST00000354880 REPS1Q96D71 796 aa15.03■□□□□ -0
CTSA-202ENST00000354880 PELI2Q9HAT8 420 aa15.03■□□□□ -0
CTSA-202ENST00000354880 ARL8BQ9NVJ2 186 aa15.03■□□□□ -0
CTSA-202ENST00000354880 SPHK1Q9NYA1 384 aa15.03■□□□□ -0
CTSA-202ENST00000354880 SNX11Q9Y5W9 270 aa15.03■□□□□ -0
CTSA-202ENST00000354880 PIPSLA2A3N6 862 aa15.03■□□□□ -0
CTSA-202ENST00000354880 SLC22A2O15244 555 aa15.03■□□□□ -0
CTSA-202ENST00000354880 CHRM5P08912 532 aaPredicted RBP15.03■□□□□ -0
CTSA-202ENST00000354880 SP9P0CG40 484 aa15.03■□□□□ -0
CTSA-202ENST00000354880 T-ENOLP0DO92 83 aa15.03■□□□□ -0
CTSA-202ENST00000354880 ADSLP30566 484 aaPredicted RBP15.03■□□□□ -0
CTSA-202ENST00000354880 ERVK-8P63133 956 aa15.03■□□□□ -0
CTSA-202ENST00000354880 KLF10Q13118 480 aa15.03■□□□□ -0
CTSA-202ENST00000354880 SPATA19Q7Z5L4 167 aa15.03■□□□□ -0
CTSA-202ENST00000354880 SYT12Q8IV01 421 aa15.03■□□□□ -0
CTSA-202ENST00000354880 ADGRF3Q8IZF5 1079 aa15.03■□□□□ -0
CTSA-202ENST00000354880 FNDC5Q8NAU1 212 aa15.03■□□□□ -0
CTSA-202ENST00000354880 ABHD11Q8NFV4 315 aa15.03■□□□□ -0
CTSA-202ENST00000354880 PPP3R2Q96LZ3 170 aa15.03■□□□□ -0
CTSA-202ENST00000354880 ACPTQ9BZG2 426 aa15.03■□□□□ -0
CTSA-202ENST00000354880 SPNS1Q9H2V7 528 aa15.03■□□□□ -0
CTSA-202ENST00000354880 TXLNGQ9NUQ3 528 aa15.03■□□□□ -0
CTSA-202ENST00000354880 CUEDC1Q9NWM3 386 aaPredicted RBP15.03■□□□□ -0
CTSA-202ENST00000354880 SLC12A4Q9UP95 1085 aa15.03■□□□□ -0
CTSA-202ENST00000354880 HEATR5BQ9P2D3 2071 aa15.02■□□□□ -0
CTSA-202ENST00000354880 CABIN1Q9Y6J0 2220 aa15.02■□□□□ -0
CTSA-202ENST00000354880 H7BY64 318 aa15.02■□□□□ -0
CTSA-202ENST00000354880 ATP5HO75947 161 aa15.02■□□□□ -0
CTSA-202ENST00000354880 UNC5CO95185 931 aa15.02■□□□□ -0
CTSA-202ENST00000354880 ANXA6P08133 673 aa15.02■□□□□ -0
CTSA-202ENST00000354880 PEBP1P30086 187 aaKnown RBP15.02■□□□□ -0
CTSA-202ENST00000354880 CCR8P51685 355 aa15.02■□□□□ -0
CTSA-202ENST00000354880 BNC1Q01954 994 aa15.02■□□□□ -0
CTSA-202ENST00000354880 MEF2AQ02078 507 aaPredicted RBP15.02■□□□□ -0
CTSA-202ENST00000354880 DMTNQ08495 405 aa15.02■□□□□ -0
CTSA-202ENST00000354880 SQLEQ14534 574 aa15.02■□□□□ -0
CTSA-202ENST00000354880 ANGPT1Q15389 498 aa15.02■□□□□ -0
CTSA-202ENST00000354880 SF1Q15637 639 aaKnown RBP15.02■□□□□ -0
CTSA-202ENST00000354880 AP5B1Q2VPB7 878 aa15.02■□□□□ -0
CTSA-202ENST00000354880 C10orf62Q5T681 223 aaPredicted RBP15.02■□□□□ -0
CTSA-202ENST00000354880 PEAR1Q5VY43 1037 aaPredicted RBP15.02■□□□□ -0
CTSA-202ENST00000354880 LAS2Q8IYD9 372 aa15.02■□□□□ -0
CTSA-202ENST00000354880 KRT78Q8N1N4 520 aa15.02■□□□□ -0
CTSA-202ENST00000354880 AVL9Q8NBF6 648 aa15.02■□□□□ -0
CTSA-202ENST00000354880 ZBTB44Q8NCP5 570 aa15.02■□□□□ -0
CTSA-202ENST00000354880 UBE2E3Q969T4 207 aa15.02■□□□□ -0
CTSA-202ENST00000354880 SLC22A18Q96BI1 424 aa15.02■□□□□ -0
CTSA-202ENST00000354880 NSL1Q96IY1 281 aa15.02■□□□□ -0
CTSA-202ENST00000354880 PRAP1Q96NZ9 151 aa15.02■□□□□ -0
CTSA-202ENST00000354880 MTERF1Q99551 399 aaKnown RBP15.02■□□□□ -0
CTSA-202ENST00000354880 ELF4Q99607 663 aaPredicted RBP15.02■□□□□ -0
CTSA-202ENST00000354880 UCKL1Q9NWZ5 548 aa15.02■□□□□ -0
CTSA-202ENST00000354880 FAM221BA6H8Z2 402 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 ISM1B1AKI9 464 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 BTN3A3O00478 584 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 CCNDBP1O95273 360 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 PCNAP12004 261 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 HSD3B1P14060 373 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 CXCR2P25025 360 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 HSD3B2P26439 372 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 ARRB1P49407 418 aaPredicted RBP15.01□□□□□ -0.01
CTSA-202ENST00000354880 ATP4BP51164 291 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 STX1BP61266 288 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 ABATP80404 500 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 CSTF3Q12996 717 aaKnown RBP15.01□□□□□ -0.01
CTSA-202ENST00000354880 DDX39BQ13838 428 aaKnown RBP15.01□□□□□ -0.01
CTSA-202ENST00000354880 SMU1Q2TAY7 513 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 DEFB133Q30KQ1 61 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 TMIGD1Q6UXZ0 262 aa15.01□□□□□ -0.01
CTSA-202ENST00000354880 TMEM26Q6ZUK4 368 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms