RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 SLC39A13Q96H72 371 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 ZNF649Q9BS31 505 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 IFT22Q9H7X7 185 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 SMCO4Q9NRQ5 59 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 FER1L6Q2WGJ9 1857 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 PRRG1O14668 218 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 TTYH3Q9C0H2 523 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 KIF25Q9UIL4 384 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 IFNA5P01569 189 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 MAP3K8P41279 467 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 TMEM31Q5JXX7 168 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 EPHA10Q5JZY3 1008 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 SLX4IPQ5VYV7 408 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 NRROSQ86YC3 692 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 SAMD12Q8N8I0 201 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 MRPL45Q9BRJ2 306 aaKnown RBP12.32□□□□□ -0.44
COL6A3-203ENST00000353578 LUZP4Q9P127 313 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 PHRF1Q9P1Y6 1649 aaKnown RBP12.32□□□□□ -0.44
COL6A3-203ENST00000353578 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 DUXAA6NLW8 204 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 MT-CO2P00403 227 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 CSF1P09603 554 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 ACVR2AP27037 513 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 RBMXP38159 391 aaKnown RBP12.32□□□□□ -0.44
COL6A3-203ENST00000353578 ABHD18Q0P651 414 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 CHDHQ8NE62 594 aaPredicted RBP12.32□□□□□ -0.44
COL6A3-203ENST00000353578 OR2M4Q96R27 311 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 SALL3Q9BXA9 1300 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 DLDP09622 509 aaKnown RBP12.32□□□□□ -0.44
COL6A3-203ENST00000353578 STAG3L1P0CL83 205 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 MMP8P22894 467 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 CRADDP78560 199 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 TSTQ16762 297 aaKnown RBP12.32□□□□□ -0.44
COL6A3-203ENST00000353578 HIST2H3PS2Q5TEC6 136 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 RASGRP3Q8IV61 690 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
COL6A3-203ENST00000353578 A0A1W2PRQ8 180 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 NUDT14O95848 222 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 CDKN2BP42772 138 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 PDX1P52945 283 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ZNF33BQ06732 778 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 C6orf141Q5SZD1 244 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 SLC35F3Q8IY50 421 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ADGRG2Q8IZP9 1017 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 TTLQ8NG68 377 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ZNF490Q9ULM2 529 aaPredicted RBP12.31□□□□□ -0.44
COL6A3-203ENST00000353578 CDRT1O95170 752 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 TFP02787 698 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 KCNA6P17658 529 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 FGFBP1Q14512 234 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ZNF598Q86UK7 904 aaKnown RBP12.31□□□□□ -0.44
COL6A3-203ENST00000353578 CANT1Q8WVQ1 401 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 PYURFQ96I23 114 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 DPCDQ9BVM2 203 aaPredicted RBP12.31□□□□□ -0.44
COL6A3-203ENST00000353578 HCN4Q9Y3Q4 1203 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ATG4BQ9Y4P1 393 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 MYOM1P52179 1685 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 MUSKO15146 869 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ZNF821O75541 412 aaPredicted RBP12.31□□□□□ -0.44
COL6A3-203ENST00000353578 UBXN7O94888 489 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 CPT1AP50416 773 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 CRISP3P54108 245 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 KIAA1161Q6NSJ0 714 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 OR10A6Q8NH74 314 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 DNTTIP1Q9H147 329 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 TMEM248Q9NWD8 314 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 CD300AQ9UGN4 299 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 RIMKLBQ9ULI2 386 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ALX3O95076 343 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 C8GP07360 202 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 PITPNBP48739 271 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 SAMD11Q96NU1 681 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 LGMNQ99538 433 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 A0A1W2PPM1 405 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 NAT1P18440 290 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 FOXN2P32314 431 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 LASP1Q14847 261 aaKnown RBP12.31□□□□□ -0.44
COL6A3-203ENST00000353578 BAK1Q16611 211 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 SETMARQ53H47 684 aaPredicted RBP12.31□□□□□ -0.44
COL6A3-203ENST00000353578 SFT2D3Q587I9 215 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ALG10BQ5I7T1 473 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 MS4A15Q8N5U1 240 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 NEK7Q8TDX7 302 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 F8VP50 259 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ADAMTS3O15072 1205 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 F10P00742 488 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 RBMS1P29558 406 aaKnown RBP12.31□□□□□ -0.44
COL6A3-203ENST00000353578 PTGIRP43119 386 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 FMO1Q01740 532 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 CLCQ05315 142 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ABRAXAS2Q15018 415 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 PXKQ7Z7A4 578 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 OR2T35Q8NGX2 323 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 LINGO1Q96FE5 620 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 ASPNQ9BXN1 380 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 KCNJ16Q9NPI9 418 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 IMPA2O14732 288 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 PROS1P07225 676 aa12.31□□□□□ -0.44
COL6A3-203ENST00000353578 COL6A1P12109 1028 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms