RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 DSG4Q86SJ6 1040 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 TAGAPQ8N103 731 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 OR7A2PQ8NGA2 310 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 CSGALNACT1Q8TDX6 532 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 NUS1Q96E22 293 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 PPP1R16AQ96I34 528 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ROGDIQ9GZN7 287 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 SLC6A17Q9H1V8 727 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 RIBC2Q9H4K1 309 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 NTN4Q9HB63 628 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 MSRAQ9UJ68 235 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 LAMA1P25391 3075 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 IGLON5A6NGN9 336 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ANKDD1BA6NHY2 528 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 J3QRK9 145 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 SLC28A1O00337 649 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 KPNA5O15131 536 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 CYP17A1P05093 508 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 PGRP06401 933 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 C1SP09871 688 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 SLC35G4P0C7Q5 338 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 SLC7A9P82251 487 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 SLC14A1Q13336 389 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 RAB39AQ14964 217 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 SLC36A3Q495N2 470 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ZNF805Q5CZA5 627 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 LYPLAL1Q5VWZ2 237 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 PARS2Q7L3T8 475 aaKnown RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 TMEM179BQ7Z7N9 219 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 C12orf40Q86WS4 652 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 TMEM126BQ8IUX1 230 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 TMEM132CQ8N3T6 1108 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ZNF513Q8N8E2 541 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 DOK4Q8TEW6 326 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 GLYATL1Q969I3 302 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ZUFSPQ96AP4 578 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 OTULINQ96BN8 352 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 FBXL8Q96CD0 374 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ZNF583Q96ND8 569 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ZNF382Q96SR6 550 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 BARD1Q99728 777 aaKnown RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 FANCEQ9HB96 536 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 SLC25A37Q9NYZ2 338 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 IFT80Q9P2H3 777 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 MAP4K5Q9Y4K4 846 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 C5orf58C9J3I9 102 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 STX16O14662 325 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 DEAF1O75398 565 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 MAPK9P45984 424 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 SIM2Q14190 667 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ZXDCQ2QGD7 858 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 FRG2Q64ET8 278 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 PRMT9Q6P2P2 845 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 THOC6Q86W42 341 aaKnown RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 ZDHHC13Q8IUH4 622 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 FRG2BQ96QU4 278 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 MACROD1Q9BQ69 325 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 DPH2Q9BQC3 489 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-201ENST00000351288 P2RY12Q9H244 342 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 NKX2-4Q9H2Z4 354 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 POPDC3Q9HBV1 291 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 NDUFA13Q9P0J0 144 aa10.09□□□□□ -0.79
SMPD4-201ENST00000351288 TRPM6Q9BX84 2022 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ISM1B1AKI9 464 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 PRRT4C9JH25 899 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ZSCAN9O15535 394 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 EPN2O95208 641 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 RASAL1O95294 804 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 PRR35P0CG20 571 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 PHC1P78364 1004 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 IL5RAQ01344 420 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 MAD2L1Q13257 205 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 TP53BP2Q13625 1128 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 SLBPQ14493 270 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 PCBP2Q15366 365 aaKnown RBP eCLIP10.08□□□□□ -0.83e-6■■■■□ 25.6
SMPD4-201ENST00000351288 FAM78AQ5JUQ0 283 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 HEATR4Q86WZ0 1026 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 SNX29P2Q8IUI4 249 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 DEFB119Q8N690 84 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 PEX13Q92968 403 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 APIPQ96GX9 242 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 UHRF1Q96T88 793 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 TOR3AQ9H497 397 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CTPS2Q9NRF8 586 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 GPRC5BQ9NZH0 403 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CLCA2Q9UQC9 943 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 KLHL20Q9Y2M5 609 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 SH3GLB1Q9Y371 365 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CCDC88CQ9P219 2028 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 GLOD5A6NK44 160 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 H3BQ06 376 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 TOR1BO14657 336 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 XPNPEP2O43895 674 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 PENKP01210 267 aaPredicted RBP10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CAPGP40121 348 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 CLCN4P51793 760 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 EMX2Q04743 252 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 KCTD21Q4G0X4 260 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF542PQ5EBM4 170 aa10.08□□□□□ -0.8
SMPD4-201ENST00000351288 ALG1LQ6GMV1 187 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms