RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GABARAPO95166 117 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ITGAMP11215 1152 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 LAMP1P11279 417 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 GJA1P17302 382 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 CCL23P55773 120 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 CYP4F8P98187 520 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 CHIT1Q13231 466 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 VMACQ2NL98 169 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ZC3H12BQ5HYM0 836 aaKnown RBP17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 BBS7Q8IWZ6 715 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ATG16L2Q8NAA4 619 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ASB11Q8WXH4 323 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 HSH2DQ96JZ2 352 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ATP13A3Q9H7F0 1226 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 TMEM165Q9HC07 324 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 PALMDQ9NP74 551 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 ZDHHC3Q9NYG2 299 aa17.55■□□□□ 0.4
PTP4A3-202ENST00000349124 EVPLLA8MZ36 301 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 PRRG1O14668 218 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 PRPS2P11908 318 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 BMP4P12644 408 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 CREMQ03060 361 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 GPR33Q49SQ1 333 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 NIPAL1Q6NVV3 410 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 YIPF6Q96EC8 236 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 CMTM7Q96FZ5 175 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 SMG9Q9H0W8 520 aaKnown RBP17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 TMEM184CQ9NVA4 438 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 GFRA2O00451 464 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 PCDHGA12O60330 932 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 JRKO75564 520 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 ABLIM3O94929 683 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 MYCP01106 439 aaPredicted RBP17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 VIPP01282 170 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 NTRK1P04629 796 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 CRYBA2P53672 197 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 MVKQ03426 396 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 FRG2Q64ET8 278 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 RNF165Q6ZSG1 346 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 SYT12Q8IV01 421 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 CHCHD4Q8N4Q1 142 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 SCAMP4Q969E2 229 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 TESCQ96BS2 214 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 FRG2BQ96QU4 278 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 SLC12A9Q9BXP2 914 aa17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 KIAA1522Q9P206 1035 aaPredicted RBP17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 SAMD4AQ9UPU9 718 aaKnown RBP17.54■□□□□ 0.4
PTP4A3-202ENST00000349124 AGAP14A8MT82 685 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 TNFRSF1BP20333 461 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 KRT20P35900 424 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 ZNF846Q147U1 533 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 OXA1LQ15070 435 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 INAQ16352 499 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 SYT16Q17RD7 645 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 RFX4Q33E94 735 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 CATSPEREQ5SY80 951 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 CAPN13Q6MZZ7 669 aaPredicted RBP17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 AHSA2Q719I0 299 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 DEFB128Q7Z7B8 93 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 GALNT13Q8IUC8 556 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 TM9SF3Q9HD45 589 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 PRM3Q9NNZ6 103 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 PCDHGB1Q9Y5G3 927 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 CASP8AP2Q9UKL3 1982 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 FAM20BO75063 409 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 FABP3P05413 133 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 HIST1H2AGP0C0S8 130 aaPredicted RBP17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 HIST1H2ADP20671 130 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 RPP38P78345 283 aaKnown RBP17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 SREBF2Q12772 1141 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 MAPK11Q15759 364 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 DUOXA1Q1HG43 343 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 LHX8Q68G74 356 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 Q6ZNB5 142 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 P2RY8Q86VZ1 359 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 HORMAD1Q86X24 394 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 ZNF566Q969W8 418 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 SH3KBP1Q96B97 665 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 HIST1H2AHQ96KK5 128 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 HIST1H2AJQ99878 128 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 H2AFJQ9BTM1 129 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 BTBD2Q9BX70 525 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 NDRG4Q9ULP0 352 aaKnown RBP17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 B3GNT3Q9Y2A9 372 aa17.53■□□□□ 0.4
PTP4A3-202ENST00000349124 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 TMEM202A6NGA9 273 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 WBP4O75554 376 aaKnown RBP17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 COX7A2P14406 83 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 IL1RNP18510 177 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 DNAJA1P31689 397 aaKnown RBP17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 SLC6A12P48065 614 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 MAD2L1BPQ15013 274 aaPredicted RBP17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 PRSS36Q5K4E3 855 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 LYPLAL1Q5VWZ2 237 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 GPR153Q6NV75 609 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 LMNTD1Q8N9Z9 388 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 SLC43A3Q8NBI5 491 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 OR2AP1Q8NGE2 309 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 IGSF21Q96ID5 467 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms