RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 HAAOP46952 286 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PSMD8P48556 350 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 DGKEP52429 567 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 IRX1P78414 480 aaPredicted RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 IL24Q13007 206 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 CDKN3Q16667 212 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 UGP2Q16851 508 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 FAM153CQ494X1 144 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 KHDC1Q4VXA5 237 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 CERCAMQ5T4B2 595 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PARS2Q7L3T8 475 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 TMPRSS6Q8IU80 811 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PDIK1LQ8N165 341 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 DNAAF3Q8N9W5 541 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 LPCAT1Q8NF37 534 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 CORO2AQ92828 525 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 FAM131CQ96AQ9 280 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SCRN2Q96FV2 425 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PPP1R16AQ96I34 528 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SMIM14Q96QK8 99 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 MCCC1Q96RQ3 725 aaPredicted RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 RANBP9Q96S59 729 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 FMO2Q99518 471 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SLC32A1Q9H598 525 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SMURF2Q9HAU4 748 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 MTRF1LQ9UGC7 380 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 EBF1Q9UH73 591 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 BPTFQ12830 3046 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SPAG17Q6Q759 2223 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 A0A0A6YYC8 382 aaPredicted RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 MAGEB16A2A368 324 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 PMS2P1A4D2B8 440 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 SDR42E2A6NKP2 422 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 I3L1I5 382 aaPredicted RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 KPNA3O00505 521 aaPredicted RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 CTDSP2O14595 271 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 BANF1O75531 89 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 DDAH2O95865 285 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 TGFAP01135 160 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 ZNF3P17036 446 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 TPH1P17752 444 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 CTPS1P17812 591 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 EPHA1P21709 976 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 BCKDHBP21953 392 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 MGAT1P26572 445 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 DRD3P35462 400 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 PSMB10P40306 273 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 SUOXP51687 545 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 SESN2P58004 480 aaPredicted RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 CNTN1Q12860 1018 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 SLC13A2Q13183 592 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 PTPRRQ15256 657 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 POM121L1PQ3SYA9 428 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 GALNTL6Q49A17 601 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 SGO1Q5FBB7 561 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 FBXO48Q5FWF7 155 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 CENPUQ71F23 418 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 ERN2Q76MJ5 926 aaKnown RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 ASCL5Q7RTU5 278 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 LAPTM4BQ86VI4 370 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 GSPT2Q8IYD1 628 aaKnown RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 DEFB119Q8N690 84 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 POC5Q8NA72 575 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 TSTD1Q8NFU3 115 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 RNASE8Q8TDE3 154 aaKnown RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 LRRC39Q96DD0 335 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 TCTN2Q96GX1 697 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 MAP6Q96JE9 813 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 LYSMD1Q96S90 227 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 WDR83Q9BRX9 315 aaKnown RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 TEX12Q9BXU0 123 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 IL22Q9GZX6 179 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 TSPYL1Q9H0U9 437 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 ZNF552Q9H707 407 aaPredicted RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 NECTIN3Q9NQS3 549 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 SYBUQ9NX95 663 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 BFARQ9NZS9 450 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 KLHL9Q9P2J3 617 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 BAIAP2L1Q9UHR4 511 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 FBXO4Q9UKT5 387 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 SCML1Q9UN30 329 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 PTPRZ1P23471 2315 aaPredicted RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 ANKRD36A6QL64 1941 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 GVINP1Q7Z2Y8 2422 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 H0YHG0 523 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 PLK4O00444 970 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 WNT9AO14904 365 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 SPINT1O43278 529 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 LDB2O43679 373 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 IL1AP01583 271 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 PRKCGP05129 697 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 CD3EP07766 207 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 ALPIP09923 528 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 ADRB3P13945 408 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 ADRA1DP25100 572 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 EEF1DP29692 281 aaKnown RBP5.02□□□□□ -1.61
VCAM1-202ENST00000347652 P2RY2P41231 377 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 DMPKQ09013 629 aa5.02□□□□□ -1.61
VCAM1-202ENST00000347652 PDIA2Q13087 525 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms