RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 OTOP2Q7RTS6 562 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 SLC46A3Q7Z3Q1 461 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 DNAJB7Q7Z6W7 309 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 CYP4Z1Q86W10 505 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 TMEM132CQ8N3T6 1108 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 NUAK2Q9H093 628 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 KCNH6Q9H252 994 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 NDFIP2Q9NV92 336 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 EXD2Q9NVH0 621 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 CRNNQ9UBG3 495 aaPredicted RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 EIF2B4Q9UI10 523 aaKnown RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 RPS6KA6Q9UK32 745 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 CARD8Q9Y2G2 431 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 N6AMT1Q9Y5N5 214 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 INSL5Q9Y5Q6 135 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 LYVE1Q9Y5Y7 322 aa15.44■□□□□ 0.06
HMGA1-202ENST00000347617 KIAA0100Q14667 2235 aaKnown RBP15.44■□□□□ 0.06
HMGA1-202ENST00000347617 F5H5T6 163 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 PLK4O00444 970 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 PER2O15055 1255 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 TEX28O15482 410 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 COCHO43405 550 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 CAPN1P07384 714 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 SPNP16150 400 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 ALOX12P18054 663 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 DAPP51397 102 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 BNC1Q01954 994 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 E2F2Q14209 437 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 STARD3Q14849 445 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 TIMM50Q3ZCQ8 353 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 ZFP69Q49AA0 526 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 RAP1GAP2Q684P5 730 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 TMC5Q6UXY8 1006 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 TMCO2Q7Z6W1 182 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-202ENST00000347617 ANGPTL6Q8NI99 470 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 RPL3LQ92901 407 aaKnown RBP15.43■□□□□ 0.06
HMGA1-202ENST00000347617 IGSF8Q969P0 613 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 CRELD1Q96HD1 420 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 CDKN2AIPNLQ96HQ2 116 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 MED30Q96HR3 178 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 RAD9AQ99638 391 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 CPPED1Q9BRF8 314 aaPredicted RBP15.43■□□□□ 0.06
HMGA1-202ENST00000347617 POLR1EQ9GZS1 481 aaKnown RBP15.43■□□□□ 0.06
HMGA1-202ENST00000347617 CLMPQ9H6B4 373 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 TBC1D14Q9P2M4 693 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 STOML2Q9UJZ1 356 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 KCTD3Q9Y597 815 aa15.43■□□□□ 0.06
HMGA1-202ENST00000347617 A0A075B6Q4 140 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 A8MU76 341 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 CCL22O00626 93 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 CAPN5O15484 640 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-202ENST00000347617 GUCY1B2O75343 617 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 UGT2B17O75795 530 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 CHRNB1P11230 501 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 PKMP14618 531 aaKnown RBP15.42■□□□□ 0.06
HMGA1-202ENST00000347617 KRT20P35900 424 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 HTR3AP46098 478 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 AGTR2P50052 363 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 GZMMP51124 257 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 CLCN4P51793 760 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 UGT2B15P54855 530 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 MRPS15P82914 257 aaKnown RBP15.42■□□□□ 0.06
HMGA1-202ENST00000347617 SLC10A7Q0GE19 358 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 TWF1Q12792 350 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 SIM2Q14190 667 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-202ENST00000347617 ALFQ53S48 1182 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 ATAD3CQ5T2N8 411 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 ANKRD34AQ69YU3 496 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 NADSYN1Q6IA69 706 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 METTL2BQ6P1Q9 378 aaKnown RBP15.42■□□□□ 0.06
HMGA1-202ENST00000347617 LILRA6Q6PI73 481 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 MSRB3Q8IXL7 192 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 ST13P5Q8NFI4 369 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-202ENST00000347617 BLOC1S5Q8TDH9 187 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 RPRD1AQ96P16 312 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-202ENST00000347617 GPR21Q99679 349 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 CDADC1Q9BWV3 514 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 KLF16Q9BXK1 252 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-202ENST00000347617 IL1RAPQ9NPH3 570 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 KRT84Q9NSB2 600 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 EHD3Q9NZN3 535 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 KIF17Q9P2E2 1029 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 MED16Q9Y2X0 877 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 PCDHGA3Q9Y5H0 932 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 KLK4Q9Y5K2 254 aa15.42■□□□□ 0.06
HMGA1-202ENST00000347617 MITFO75030 526 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 F11P03951 625 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 PGRP06401 933 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 FSHRP23945 695 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 FMO4P31512 558 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 GGT5P36269 586 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 RPS5P46782 204 aaKnown RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 KCNQ1P51787 676 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 NKX2-5P52952 324 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 CDH4P55283 916 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 TIGD6Q17RP2 521 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 HABP4Q5JVS0 413 aaKnown RBP15.41■□□□□ 0.06
HMGA1-202ENST00000347617 IL31Q6EBC2 164 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 LETMD1Q6P1Q0 360 aa15.41■□□□□ 0.06
HMGA1-202ENST00000347617 ERICH5Q6P6B1 374 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms