RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SPTBP11277 2137 aa15.11■□□□□ 0.01
TSPAN4-201ENST00000346501 IGSF10Q6WRI0 2623 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 HYKKA2RU49 373 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 DSCR3O14972 297 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 RFPL1O75677 317 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 ITGAXP20702 1163 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 PHBP35232 272 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 SPRP35270 261 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 GP5P40197 560 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 MAGEA4P43358 317 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 RRADP55042 308 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 SLC7A5Q01650 507 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 GUCY2DQ02846 1103 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 RELAQ04206 551 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 GLE1Q53GS7 698 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 ATP1A1-AS1Q5TC04 95 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 AGTRAPQ6RW13 159 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 FRA10AC1Q70Z53 315 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 RNF44Q7L0R7 432 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 EXD3Q8N9H8 876 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 C9orf43Q8TAL5 461 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 ANKRD7Q92527 254 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 CABS1Q96KC9 395 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 GBP5Q96PP8 586 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 LRRC1Q9BTT6 524 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 GPAMQ9HCL2 828 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 ACSS2Q9NR19 701 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 TMEM184CQ9NVA4 438 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 PSAT1Q9Y617 370 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 KCNMB2Q9Y691 235 aa15.1■□□□□ 0.01
TSPAN4-201ENST00000346501 SEC16AO15027 2179 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 PCM1Q15154 2024 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 TCRBV9S1A1TA0A576 114 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 H3BMH7 237 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 PEX12O00623 359 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 HCRTR1O43613 425 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 CTSVO60911 334 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 ZNF37AP17032 561 aaPredicted RBP15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 TBPL1P62380 186 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 NFATC3Q12968 1075 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 NAB1Q13506 487 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 NAE1Q13564 534 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 USP10Q14694 798 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 SSPNQ14714 243 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 NDUFA9Q16795 377 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 GRTP1Q5TC63 336 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 PRMT9Q6P2P2 845 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 FAM198BQ6UWH4 519 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 ZNF843Q8N446 348 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 MMGT1Q8N4V1 131 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 CEP112Q8N8E3 955 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 FKBP10Q96AY3 582 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 RUFY1Q96T51 708 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 OLFM1Q99784 485 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 EGFL8Q99944 293 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 ATG10Q9H0Y0 220 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 SLC6A20Q9NP91 592 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 CTNNAL1Q9UBT7 734 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 NXT1Q9UKK6 140 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 ADAMTS6Q9UKP5 1117 aa15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 NOVA2Q9UNW9 492 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 PTRH2Q9Y3E5 179 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-201ENST00000346501 ATRXP46100 2492 aa15.08■□□□□ 0.01
TSPAN4-201ENST00000346501 FITM1A5D6W6 292 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 B8ZZF3 427 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 H0YGG7 62 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 GUCA1CO95843 209 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 ALBP02768 609 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 ANXA5P08758 320 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 STMN1P16949 149 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 PMS2P54278 862 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 EMP3P54852 163 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 TAS2R39P59534 338 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 ARF3P61204 181 aaPredicted RBP15.08■□□□□ 0
TSPAN4-201ENST00000346501 RPS15AP62244 130 aaKnown RBP15.08■□□□□ 0
TSPAN4-201ENST00000346501 TIAL1Q01085 375 aaKnown RBP eCLIP15.08■□□□□ 0
TSPAN4-201ENST00000346501 OCA2Q04671 838 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 GARNL3Q5VVW2 1013 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 ZNF385CQ66K41 422 aaPredicted RBP15.08■□□□□ 0
TSPAN4-201ENST00000346501 LCN10Q6JVE6 187 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 ADAMTSL2Q86TH1 951 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 PAQR7Q86WK9 346 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 APLFQ8IW19 511 aaPredicted RBP15.08■□□□□ 0
TSPAN4-201ENST00000346501 CSNK1A1LQ8N752 337 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 PPM1NQ8N819 430 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 TMEM102Q8N9M5 508 aaPredicted RBP15.08■□□□□ 0
TSPAN4-201ENST00000346501 COL26A1Q96A83 441 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 PTERQ96BW5 349 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 THAP11Q96EK4 314 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 ZNF285Q96NJ3 590 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 STARD5Q9NSY2 213 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 TLK1Q9UKI8 766 aa15.08■□□□□ 0
TSPAN4-201ENST00000346501 SNRNP200O75643 2136 aaKnown RBP15.08■□□□□ 0
TSPAN4-201ENST00000346501 ESYT3A0FGR9 886 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 FAM159BA6NKW6 160 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 H7BY64 318 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 KLHL41O60662 606 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 TSPAN12O95859 305 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 OTX2P32243 289 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 SLC9A5Q14940 896 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms