RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SCHIP1Q9P0W5 487 aaPredicted RBP20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 SIT1Q9Y3P8 196 aa20.72■□□□□ 0.91
TSPAN3-202ENST00000346495 PIPSLA2A3N6 862 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 DYTNA2CJ06 578 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 METTL12A8MUP2 240 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 CAPN3P20807 821 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 PXNP49023 591 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 ILF3Q12906 894 aaKnown RBP eCLIP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 C6orf163Q5TEZ5 329 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 BNC2Q6ZN30 1099 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 LAS2Q8IYD9 372 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 FAM9CQ8IZT9 166 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 LIX1Q8N485 282 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 OR52E1Q8NGJ3 308 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 KLHDC7BQ96G42 594 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 METTL2AQ96IZ6 378 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 TEX37Q96LM6 180 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 SERPINI1Q99574 410 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 IER2Q9BTL4 223 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 RASSF4Q9H2L5 321 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 DENND2DQ9H6A0 471 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 KIR3DX1Q9H7L2 352 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 PELI2Q9HAT8 420 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 VPS29Q9UBQ0 182 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 TAC3Q9UHF0 121 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 SPTY2D1-AS1A0A0U1RR47 76 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 A0A1W2PP18 115 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 PRPS2P11908 318 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 CDH1P12830 882 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 JAK1P23458 1154 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 CD27P26842 260 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 ZFP36L2P47974 494 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 DDX39BQ13838 428 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 VPS26BQ4G0F5 336 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 USP39Q53GS9 565 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 PGM2L1Q6PCE3 622 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 SLC30A9Q6PML9 568 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 NET1Q7Z628 596 aaPredicted RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 DCP2Q8IU60 420 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 KRT78Q8N1N4 520 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 CCL4L1Q8NHW4 92 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 HUS1BQ8NHY5 278 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 ROPN1LQ96C74 230 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 SLC6A18Q96N87 628 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 MTERF1Q99551 399 aaKnown RBP20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 ZBTB18Q99592 522 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 SLC52A3Q9NQ40 469 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 AASDHPPTQ9NRN7 309 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 SLC7A8Q9UHI5 535 aa20.71■□□□□ 0.91
TSPAN3-202ENST00000346495 PLXND1Q9Y4D7 1925 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 A0A1W2PPV9 198 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 CCDC154A6NI56 674 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 ANKRD28O15084 1053 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 ATP6V1G2O95670 118 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 AMD1P17707 334 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 CXCL12P48061 93 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 EIF2B5Q13144 721 aaKnown RBP20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 NRROSQ86YC3 692 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 PHACTR4Q8IZ21 702 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 FBXW8Q8N3Y1 598 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 LINC01555Q8NAE3 123 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 APIPQ96GX9 242 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 SPACA7Q96KW9 195 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 ACAT2Q9BWD1 397 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 ACTL8Q9H568 366 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 PRM3Q9NNZ6 103 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 BAIAP2L1Q9UHR4 511 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 TSC22D4Q9Y3Q8 395 aa20.7■□□□□ 0.9
TSPAN3-202ENST00000346495 MAGEB17A8MXT2 336 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 C9JVG2 144 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 FOXE1O00358 373 aaPredicted RBP20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 CFLARO15519 480 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 EML2O95834 649 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 BCKDHAP12694 445 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 F3P13726 295 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 CXCR2P25025 360 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 IL12AP29459 219 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 PSME3P61289 254 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 PHEXP78562 749 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 FZD2Q14332 565 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 RNF175Q8N4F7 328 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 GLB1L3Q8NCI6 653 aaPredicted RBP20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 GPBAR1Q8TDU6 330 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 FCRL1Q96LA6 429 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 NRTNQ99748 197 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 GSDMCQ9BYG8 508 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 DPY30Q9C005 99 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 XKR8Q9H6D3 395 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 NMRK1Q9NWW6 199 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 MUTYHQ9UIF7 546 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 LEF1Q9UJU2 399 aaPredicted RBP20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 CROTQ9UKG9 612 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 ICKQ9UPZ9 632 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 FANCMQ8IYD8 2048 aa20.69■□□□□ 0.9
TSPAN3-202ENST00000346495 A6NCN8 305 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 DCNP07585 359 aaKnown RBP20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 BLKP51451 505 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 MTTPP55157 894 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 TCEA2Q15560 299 aa20.68■□□□□ 0.9
TSPAN3-202ENST00000346495 TRMT5Q32P41 509 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms