RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 IMPA1P29218 277 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 MMP12P39900 470 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 TMEM115Q12893 351 aaPredicted RBP14.95□□□□□ -0.02
UPF3B-202ENST00000345865 DUOXA1Q1HG43 343 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 CTU2Q2VPK5 515 aaKnown RBP14.95□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF697Q5TEC3 545 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 DPPA4Q7L190 304 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 FAM9CQ8IZT9 166 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 LMNTD1Q8N9Z9 388 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 SDCCAG3Q96C92 435 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 SAMD11Q96NU1 681 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 PANX1Q96RD7 426 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 DCUN1D5Q9BTE7 237 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 AASDHPPTQ9NRN7 309 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 NFKBIL1Q9UBC1 381 aaPredicted RBP14.95□□□□□ -0.02
UPF3B-202ENST00000345865 FBXO10Q9UK96 956 aa14.95□□□□□ -0.02
UPF3B-202ENST00000345865 PCM1Q15154 2024 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 MAGEB17A8MXT2 336 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 H3BMQ9 156 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 CLIC1O00299 241 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 FPGTO14772 594 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 KIAA0355O15063 1070 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 UGDHO60701 494 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 KCNK5O95279 499 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 LAMP1P11279 417 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 EPCAMP16422 314 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ENGP17813 658 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 CRHBPP24387 322 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 EEF1B2P24534 225 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 DCKP27707 260 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 MAP4P27816 1152 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 EMP3P54852 163 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 RAE1P78406 368 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 CSTF3Q12996 717 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 KCNC3Q14003 757 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 LAPTM4AQ15012 233 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 MEP1AQ16819 746 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 PRSS36Q5K4E3 855 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 XAF1Q6GPH4 301 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ZCCHC8Q6NZY4 707 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF773Q6PK81 442 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 PARS2Q7L3T8 475 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 GPR155Q7Z3F1 870 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 R3HCC1LQ7Z5L2 792 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 C12orf40Q86WS4 652 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ADHFE1Q8IWW8 467 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 C8orf59Q8N0T1 100 aaPredicted RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 OR5K1Q8NHB7 308 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 CDC26Q8NHZ8 85 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 NELL1Q92832 810 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 TMEM159Q96B96 161 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 COG8Q96MW5 612 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 RDH12Q96NR8 316 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 PKP4Q99569 1192 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 DOK1Q99704 481 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 RBM4BQ9BQ04 359 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 DPH2Q9BQC3 489 aaPredicted RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 WRAP53Q9BUR4 548 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 RBM4Q9BWF3 364 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ING2Q9H160 280 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 TBC1D14Q9P2M4 693 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ABCG2Q9UNQ0 655 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF701M0R085 212 aaPredicted RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 SPINT1O43278 529 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 HS6ST1O60243 411 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 CPNE6O95741 557 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 CALRP27797 417 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 PBLDP30039 288 aaPredicted RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 MAGEA2P43356 314 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 STT3AP46977 705 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 PRLHRP49683 370 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF284Q2VY69 593 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 SYTL3Q4VX76 610 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ARHGAP15Q53QZ3 475 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 TCEAL5Q5H9L2 206 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 TMEM220Q6QAJ8 160 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF621Q6ZSS3 439 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 GRASPQ7Z6J2 395 aaPredicted RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 SERPINA11Q86U17 422 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 PTOV1Q86YD1 416 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 CHDHQ8NE62 594 aaPredicted RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 PNPT1Q8TCS8 783 aaKnown RBP14.94□□□□□ -0.02
UPF3B-202ENST00000345865 POF1BQ8WVV4 589 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 AP2M1Q96CW1 435 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 VPS35Q96QK1 796 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 MARK1Q9P0L2 795 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 COQ6Q9Y2Z9 468 aa14.94□□□□□ -0.02
UPF3B-202ENST00000345865 REV3LO60673 3130 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 E2F6O75461 281 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 RECQL5O94762 991 aaPredicted RBP14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ZNF682O95780 498 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 HTR1AP08908 422 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 CISD3P0C7P0 127 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 ELFN1P0C7U0 828 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 COX7A2P14406 83 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 GPX2P18283 190 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 AGXTP21549 392 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 MATN1P21941 496 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 IRS1P35568 1242 aa14.93□□□□□ -0.02
UPF3B-202ENST00000345865 TRPC1P48995 793 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms