RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 SCML4Q8N228 414 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 NEIL2Q969S2 332 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
CASC4-202ENST00000345795 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 SMPD3Q9NY59 655 aaPredicted RBP12.91□□□□□ -0.34
CASC4-202ENST00000345795 FNIP2Q9P278 1114 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 PIKFYVEQ9Y2I7 2098 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 TMEM247A6NEH6 219 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 FADS2P1A8MWK0 482 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 TSPAN12O95859 305 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 GNRH1P01148 92 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 TBPL1P62380 186 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 SPIBQ01892 262 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 MAD2L1Q13257 205 aaPredicted RBP12.91□□□□□ -0.34
CASC4-202ENST00000345795 AHI1Q8N157 1196 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 CNIH3Q8TBE1 160 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 CIDECQ96AQ7 238 aaPredicted RBP12.91□□□□□ -0.34
CASC4-202ENST00000345795 ZFRQ96KR1 1074 aaKnown RBP12.91□□□□□ -0.34
CASC4-202ENST00000345795 UGT2B28Q9BY64 529 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 DOLKQ9UPQ8 538 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
CASC4-202ENST00000345795 ARHGEF15O94989 841 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 C6orf47O95873 294 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 IL6P05231 212 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 CLK1P49759 484 aaKnown RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 TRAF3Q13114 568 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 MTA1Q13330 715 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 C1orf61Q13536 156 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 Q6ZPB1 254 aaPredicted RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 TICAM1Q8IUC6 712 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 CACTIN-AS1Q8N1I8 211 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 CLIP4Q8N3C7 705 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 HUS1BQ8NHY5 278 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 ROPN1LQ96C74 230 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 NRBF2Q96F24 287 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 DACH2Q96NX9 599 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 F2RL3Q96RI0 385 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 BBS4Q96RK4 519 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 RPP25Q9BUL9 199 aaKnown RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 DUSP26Q9BV47 211 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 FANCEQ9HB96 536 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 SUCOQ9UBS9 1254 aaKnown RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 CDC14AQ9UNH5 594 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 PLEKHM1Q9Y4G2 1056 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 OTOL1A6NHN0 477 aaPredicted RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 FAM20BO75063 409 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 PERM1Q5SV97 790 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 TANGO2Q6ICL3 276 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 XKR5Q6UX68 686 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 CYHR1Q6ZMK1 362 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 AHSA2Q719I0 299 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 AMZ2Q86W34 360 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 OR4E2Q8NGC2 313 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 NETO1Q8TDF5 533 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 SGCDQ92629 289 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 NR1H4Q96RI1 486 aaPredicted RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 C17orf62Q9BQA9 187 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 ZCCHC2Q9C0B9 1178 aaKnown RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 REEP1Q9H902 201 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 CARS2Q9HA77 564 aaKnown RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 PAK6Q9NQU5 681 aaPredicted RBP12.9□□□□□ -0.34
CASC4-202ENST00000345795 AASDHPPTQ9NRN7 309 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 SLC6A13Q9NSD5 602 aa12.9□□□□□ -0.34
CASC4-202ENST00000345795 FAM92AA1XBS5 289 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 PRKRAO75569 313 aaKnown RBP12.9□□□□□ -0.35
CASC4-202ENST00000345795 SOX14O95416 240 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 PRNPP04156 253 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 CYP17A1P05093 508 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 TFPTP0C1Z6 253 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 TIMP2P16035 220 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 MAPK1P28482 360 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 BNIP2Q12982 314 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 ZNF234Q14588 700 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 UGT3A2Q3SY77 523 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 ZNF805Q5CZA5 627 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 C17orf64Q86WR6 236 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 PLA2G15Q8NCC3 412 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 ISL2Q96A47 359 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 OSBPL11Q9BXB4 747 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 ZBP1Q9H171 429 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 ANKRA2Q9H9E1 313 aa12.9□□□□□ -0.35
CASC4-202ENST00000345795 BBIP1A8MTZ0 92 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 C1QTNF3-AMACRE9PGA6 284 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 SYT16Q17RD7 645 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 FAM78AQ5JUQ0 283 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 GHDCQ8N2G8 530 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 ZNF540Q8NDQ6 660 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 TRPV3Q8NET8 790 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 KCNC2Q96PR1 638 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 CCDC177Q9NQR7 707 aaPredicted RBP12.89□□□□□ -0.35
CASC4-202ENST00000345795 FZD4Q9ULV1 537 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 ZNF510Q9Y2H8 683 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 GMPPBQ9Y5P6 360 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 RP1P56715 2156 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 KRBA1A5PL33 1030 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 NFATC1O95644 943 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 ETFAP13804 333 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 BUD31P41223 144 aaPredicted RBP12.89□□□□□ -0.35
CASC4-202ENST00000345795 CSNK1DP48730 415 aa12.89□□□□□ -0.35
CASC4-202ENST00000345795 EGFLAMQ63HQ2 1017 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms